RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 PRSS48Q7RTY5 328 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 CLEC1AQ8NC01 280 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 THAP7Q9BT49 309 aaPredicted RBP12.88□□□□□ -0.35
COL4A1-201ENST00000375820 PCDHA9Q9Y5H5 950 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 PPP6CO00743 305 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 DENRO43583 198 aaKnown RBP12.88□□□□□ -0.35
COL4A1-201ENST00000375820 CLLU1OSQ5K130 101 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 CST9LP1Q5W188 147 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 AMIGO3Q86WK7 504 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 GIMAP5Q96F15 307 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 BMFQ96LC9 184 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 ACOT13Q9NPJ3 140 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 CD207Q9UJ71 328 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 STYXL1Q9Y6J8 313 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 TGM4P49221 684 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 ACSM3Q53FZ2 586 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 UNC5DQ6UXZ4 953 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 MS4A15Q8N5U1 240 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 RETREG1Q9H6L5 497 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 PLSCR5A0PG75 271 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 MAOAP21397 527 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 OMGP23515 440 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 GABARAPL2P60520 117 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 PRPS1P60891 318 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 SLC14A1Q13336 389 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 B3GLCTQ6Y288 498 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 TSPYL5Q86VY4 417 aaPredicted RBP12.88□□□□□ -0.35
COL4A1-201ENST00000375820 TCEAL8Q8IYN2 117 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 L3HYPDHQ96EM0 354 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 SLC12A9Q9BXP2 914 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 MICAL3Q7RTP6 2002 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 BET1O15155 118 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 HMGN2P05204 90 aaKnown RBP12.88□□□□□ -0.35
COL4A1-201ENST00000375820 CDK1P06493 297 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 SLC6A11P48066 632 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 RAB31Q13636 194 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 NR0B2Q15466 257 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 FXNQ16595 210 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 EMC10Q5UCC4 262 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 EGFL6Q8IUX8 553 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 OR4F15Q8NGB8 312 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 WWTR1Q9GZV5 400 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 FOSL1P15407 271 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 GIFP27352 417 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 TCTE1Q5JU00 501 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 SLC22A10Q63ZE4 541 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 OR7E24Q6IFN5 339 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 ZNF585AQ6P3V2 769 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 C12orf45Q8N5I9 185 aaPredicted RBP12.88□□□□□ -0.35
COL4A1-201ENST00000375820 ACOT4Q8N9L9 421 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 SLC30A3Q99726 388 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 CCDC32Q9BV29 185 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 EGLN3Q9H6Z9 239 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 DYNLRB1Q9NP97 96 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 SLC6A5Q9Y345 797 aa12.88□□□□□ -0.35
COL4A1-201ENST00000375820 CICQ96RK0 1608 aaPredicted RBP12.87□□□□□ -0.35
COL4A1-201ENST00000375820 H3BMQ9 156 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 K7EPK0 472 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 IMPA2O14732 288 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 TXNL1O43396 289 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 FBXO24O75426 580 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 TUSC2O75896 110 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 ZNF252P-AS1Q0IIN9 211 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 IRF4Q15306 451 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 TRIM61Q5EBN2 209 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 ENTPD8Q5MY95 495 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 ZNF704Q6ZNC4 412 aaPredicted RBP12.87□□□□□ -0.35
COL4A1-201ENST00000375820 LANCL3Q6ZV70 420 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 FAM71E2Q8N5Q1 922 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 FIBINQ8TAL6 211 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 BORCS6Q96GS4 357 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 SAP130Q9H0E3 1048 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 TAS2R8Q9NYW2 309 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 CITO14578 2027 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 GABRR3A8MPY1 467 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 AKAIN1P0CW23 69 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 CRABP1P29762 137 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 IL13RA1P78552 427 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 ARHGAP19Q14CB8 494 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 LCN8Q6JVE9 175 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 PAPD5Q8NDF8 572 aaKnown RBP12.87□□□□□ -0.35
COL4A1-201ENST00000375820 TRUB1Q8WWH5 349 aaKnown RBP12.87□□□□□ -0.35
COL4A1-201ENST00000375820 ARL11Q969Q4 196 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 HYLS1Q96M11 299 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 INTS14Q96SY0 518 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 ENKD1Q9H0I2 346 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 OR10A5Q9H207 317 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 OR10A2Q9H208 303 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 CHRDQ9H2X0 955 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 HCSTQ9UBK5 93 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 MYH2Q9UKX2 1941 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 ANTXRLA6NF34 631 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 PTGESO14684 152 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 MT-CO2P00403 227 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 M6PRP20645 277 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 PRAMEF20Q5VT98 475 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 STEAP4Q687X5 459 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 ACVR1CQ8NER5 493 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 FNDC9Q8TBE3 224 aa12.87□□□□□ -0.35
COL4A1-201ENST00000375820 BSCL2Q96G97 398 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms