RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 SLC35A3Q9Y2D2 325 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 MED16Q9Y2X0 877 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 RNF215Q9Y6U7 377 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 CD1CP29017 333 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 DUSP5Q16690 384 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 VWA2Q5GFL6 755 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 Q7L0L9 218 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 RABEPKQ7Z6M1 372 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 MOSPD3O75425 235 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 MAS1P04201 325 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 COL9A1P20849 921 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 MAPK3P27361 379 aaPredicted RBP16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 GMFBP60983 142 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 ALG8Q9BVK2 526 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 METTL21EPA6NDL7 271 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 FGF17O60258 216 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 CTNSO60931 367 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 PNMTP11086 282 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 MED25Q71SY5 747 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 B3GNT8Q7Z7M8 397 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 S100A16Q96FQ6 103 aaKnown RBP16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 ARHGAP9Q9BRR9 750 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 AMBRA1Q9C0C7 1298 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 MED20Q9H944 212 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 DNAJB5O75953 348 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 PIGAP37287 484 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF717Q9BY31 904 aaPredicted RBP16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 NAA50Q9GZZ1 169 aaKnown RBP16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 PPIL1Q9Y3C6 166 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 CIB4A0PJX0 185 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 FCMRO60667 390 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 SLC35E2P0CK97 266 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 RPS5P46782 204 aaKnown RBP16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 HTR4Q13639 388 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 LRIF1Q5T3J3 769 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF691Q5VV52 312 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 BCDIN3DQ7Z5W3 292 aaKnown RBP16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 TMED4Q7Z7H5 227 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 ASIC5Q9NY37 505 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 MYOFQ9NZM1 2061 aa16.74■□□□□ 0.27
PTPDC1-202ENST00000375360 SLC5A2P31639 672 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 CA5AP35218 305 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 PSMB10P40306 273 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 WNT4P56705 351 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 GXYLT1Q4G148 440 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 OR2G6Q5TZ20 316 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 VNN3Q9NY84 501 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 HEMK1Q9Y5R4 338 aaPredicted RBP16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 SIPA1L1O43166 1804 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 A6NHS1 94 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF878C9JN71 531 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF264O43296 627 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 SLITRK5O94991 958 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF84P51523 738 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 PRPS1P60891 318 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 C4orf46Q504U0 113 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 LTB4R2Q9NPC1 389 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 ALPK2Q86TB3 2170 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 H3BMQ9 156 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 SULT2B1O00204 365 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 OR2T1O43869 369 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 CD22P20273 847 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 RIDAP52758 137 aaKnown RBP16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 DCDP81605 110 aaKnown RBP16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 CMPK2Q5EBM0 449 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 SPRED1Q7Z699 444 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF227Q86WZ6 799 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 ANKRD53Q8N9V6 530 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 OR8S1Q8NH09 359 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 LINC00615Q96LM1 132 aaPredicted RBP16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 COG8Q96MW5 612 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 NUDT22Q9BRQ3 303 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 FOLH1BQ9HBA9 442 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 SESN1Q9Y6P5 492 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 IGLV3-16A0A075B6K0 115 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 CAPNS1P04632 268 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 BTG2P78543 158 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 PLP2Q04941 152 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF91Q05481 1191 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF547Q8IVP9 402 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 SPEM1Q8N4L4 309 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 TRIM63Q969Q1 353 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 TNFRSF13CQ96RJ3 184 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 STUB1Q9UNE7 303 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 FARSAQ9Y285 508 aaKnown RBP16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 SLC17A4Q9Y2C5 497 aa16.73■□□□□ 0.27
PTPDC1-202ENST00000375360 DLGAP1O14490 977 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 GSTT2BP0CG30 244 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 TGFBR2P37173 567 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 CD97P48960 835 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 VASPP50552 380 aaPredicted RBP16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 ALDH16A1Q8IZ83 802 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 RPL3LQ92901 407 aaKnown RBP16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 SLC6A8P48029 635 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 SCRN3Q0VDG4 424 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF782Q6ZMW2 699 aaPredicted RBP16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 CNOT9Q92600 299 aaKnown RBP16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 CCDC74AQ96AQ1 378 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 OLAHQ9NV23 265 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 ANKRD10Q9NXR5 420 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms