RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 OR2AG1Q9H205 316 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 S1PR5Q9H228 398 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 SLC25A32Q9H2D1 315 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 OR51M1Q9H341 326 aa11.34□□□□□ -0.59
C9orf3-203ENST00000375315 TEX10Q9NXF1 929 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-203ENST00000375315 TRBC2A0A5B9 178 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 IGLON5A6NGN9 336 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ARPC5O15511 151 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 PRAMEF2O60811 474 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 PRNPP04156 253 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ACP2P11117 423 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 LAMP1P11279 417 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 CCR7P32248 378 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 GPR1P46091 355 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 PITPNAQ00169 270 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 UBXN2BQ14CS0 331 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 RNASE12Q5GAN4 147 aaKnown RBP11.33□□□□□ -0.6
C9orf3-203ENST00000375315 SLC25A30Q5SVS4 291 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 TMEM88Q6PEY1 159 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 IL20RBQ6UXL0 311 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 SPAG16Q8N0X2 631 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 NFKBIDQ8NI38 313 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 GLYATL2Q8WU03 294 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ATG10Q9H0Y0 220 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 WDR26Q9H7D7 661 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ASB6Q9NWX5 421 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ZNF282Q9UDV7 671 aaPredicted RBP11.33□□□□□ -0.6
C9orf3-203ENST00000375315 LAMA1P25391 3075 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 TRBV4-1A0A0J9YWV2 114 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 EDDM13A0A1B0GTR0 161 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 C1orf226A1L170 272 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 SLC31A1O15431 190 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 FZD7O75084 574 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ITGA10O75578 1167 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 SERPINA3P01011 423 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 MT-ND4P03905 459 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 C6P13671 934 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ADRB3P13945 408 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 CD96P40200 585 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 KCNJ3P48549 501 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 CSNK1DP48730 415 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 MTNR1BP49286 362 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 PSMA6P60900 246 aaKnown RBP11.33□□□□□ -0.6
C9orf3-203ENST00000375315 SERTAD2Q14140 314 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ELAVL3Q14576 367 aaKnown RBP11.33□□□□□ -0.6
C9orf3-203ENST00000375315 DCST1Q5T197 706 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ANXA8L1Q5VT79 327 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 Q6ZTK2 550 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 SVBPQ8N300 66 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 MEIOBQ8N635 442 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 FAM71CQ8NEG0 241 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 BPIFCQ8NFQ6 507 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 OR14C36Q8NHC7 312 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ELP5Q8TE02 316 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 WFIKKN2Q8TEU8 576 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 CMSS1Q9BQ75 279 aaKnown RBP11.33□□□□□ -0.6
C9orf3-203ENST00000375315 CRB3Q9BUF7 120 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 DDX31Q9H8H2 851 aaKnown RBP11.33□□□□□ -0.6
C9orf3-203ENST00000375315 PIPOXQ9P0Z9 390 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 NFKBIL1Q9UBC1 381 aaPredicted RBP11.33□□□□□ -0.6
C9orf3-203ENST00000375315 PCDHB1Q9Y5F3 818 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 C2CD4DB7Z1M9 353 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 GALR3O60755 368 aaPredicted RBP11.33□□□□□ -0.6
C9orf3-203ENST00000375315 AQP8O94778 261 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 EGFP01133 1207 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ETFAP13804 333 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 NR0B1P51843 470 aaKnown RBP11.33□□□□□ -0.6
C9orf3-203ENST00000375315 AVPI1Q5T686 147 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 TMEM220Q6QAJ8 160 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 LRRN1Q6UXK5 716 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ZBTB2Q8N680 514 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 IQCF1Q8N6M8 205 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 PRDM9Q9NQV7 894 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 NPDC1Q9NQX5 325 aaPredicted RBP11.33□□□□□ -0.6
C9orf3-203ENST00000375315 PTGFRNQ9P2B2 879 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 ACSL6Q9UKU0 697 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 OR1A2Q9Y585 309 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 PIAS3Q9Y6X2 628 aa11.33□□□□□ -0.6
C9orf3-203ENST00000375315 TP53BP1Q12888 1972 aaPredicted RBP11.32□□□□□ -0.6
C9orf3-203ENST00000375315 SOX1O00570 391 aaPredicted RBP11.32□□□□□ -0.6
C9orf3-203ENST00000375315 SPP1P10451 314 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 DGKAP23743 735 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 SOX18P35713 384 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 GPR143P51810 404 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 TNFRSF17Q02223 184 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 GAB1Q13480 694 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 DYRK1AQ13627 763 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 CPTPQ5TA50 214 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 STX12Q86Y82 276 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 SLC30A8Q8IWU4 369 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 OXR1Q8N573 874 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 FRMD1Q8N878 549 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 C2CD4CQ8TF44 421 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 ASZ1Q8WWH4 475 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 KAT2AQ92830 837 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 TEFMQ96QE5 360 aaKnown RBP11.32□□□□□ -0.6
C9orf3-203ENST00000375315 DMRTA2Q96SC8 542 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 PKP4Q99569 1192 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 NRTNQ99748 197 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 SLC22A11Q9NSA0 550 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms