RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 NLRC3Q7RTR2 1065 aa19.64■□□□□ 0.74
UPF3A-202ENST00000375299 PRSS42Q7Z5A4 293 aa19.64■□□□□ 0.74
UPF3A-202ENST00000375299 LSRQ86X29 649 aaPredicted RBP19.64■□□□□ 0.74
UPF3A-202ENST00000375299 FTMTQ8N4E7 242 aa19.64■□□□□ 0.74
UPF3A-202ENST00000375299 SLC44A3Q8N4M1 653 aa19.64■□□□□ 0.74
UPF3A-202ENST00000375299 OR9A2Q8NGT5 310 aa19.64■□□□□ 0.74
UPF3A-202ENST00000375299 CXorf40AQ8TE69 158 aa19.64■□□□□ 0.74
UPF3A-202ENST00000375299 RBPMSQ93062 196 aaKnown RBP19.64■□□□□ 0.74
UPF3A-202ENST00000375299 ELP4Q96EB1 424 aa19.64■□□□□ 0.74
UPF3A-202ENST00000375299 GSX2Q9BZM3 304 aa19.64■□□□□ 0.74
UPF3A-202ENST00000375299 C20orf85Q9H1P6 137 aa19.64■□□□□ 0.74
UPF3A-202ENST00000375299 BEX1Q9HBH7 125 aa19.64■□□□□ 0.74
UPF3A-202ENST00000375299 ZNF275Q9NSD4 429 aaPredicted RBP19.64■□□□□ 0.74
UPF3A-202ENST00000375299 IGKV1-8A0A0C4DH67 115 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 SLC22A31A6NKX4 558 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 ERI3O43414 337 aaKnown RBP19.64■□□□□ 0.73
UPF3A-202ENST00000375299 GSTZ1O43708 216 aaPredicted RBP19.64■□□□□ 0.73
UPF3A-202ENST00000375299 HPXP02790 462 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 MRPL3P09001 348 aaKnown RBP19.64■□□□□ 0.73
UPF3A-202ENST00000375299 ATF1P18846 271 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 HIST1H1TP22492 207 aaPredicted RBP19.64■□□□□ 0.73
UPF3A-202ENST00000375299 PPM1AP35813 382 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 SELENOPP49908 381 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 EPHA4P54764 986 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 RPS7P62081 194 aaKnown RBP19.64■□□□□ 0.73
UPF3A-202ENST00000375299 DBPQ10586 325 aaPredicted RBP19.64■□□□□ 0.73
UPF3A-202ENST00000375299 C18orf63Q68DL7 685 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 BAIAP2L2Q6UXY1 529 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 TTLQ8NG68 377 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 OR4D9Q8NGE8 314 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 MACROD1Q9BQ69 325 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 GSDMCQ9BYG8 508 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 TBX21Q9UL17 535 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 CAMK2AQ9UQM7 478 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 WNT6Q9Y6F9 365 aa19.64■□□□□ 0.73
UPF3A-202ENST00000375299 LTBP2Q14767 1821 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 A0A1W2PPL8 197 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 TUBAL3A6NHL2 446 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 J3QLW9 94 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 SAGP10523 405 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-202ENST00000375299 F3P13726 295 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 ZNF19P17023 458 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 FUT1P19526 365 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 DRD5P21918 477 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 BAMBIQ13145 260 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 TEAD2Q15562 447 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 ZIC1Q15915 447 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 SLC48A1Q6P1K1 146 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 RPTNQ6XPR3 784 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 ACOT4Q8N9L9 421 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 ZNF527Q8NB42 609 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 ACTRT3Q9BYD9 372 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 RBCK1Q9BYM8 510 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 METTL17Q9H7H0 456 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-202ENST00000375299 TM7SF3Q9NS93 570 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 KCMF1Q9P0J7 381 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 CES1P1Q9UKY3 287 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 A0A0B4J203 849 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 TOXO94900 526 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 CTRB1P17538 263 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 BMP7P18075 431 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 VASPP50552 380 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-202ENST00000375299 ZNF85Q03923 595 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 AGERQ15109 404 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 ZSWIM7Q19AV6 140 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 DMKNQ6E0U4 476 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-202ENST00000375299 CTRB2Q6GPI1 263 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 FRRS1Q6ZNA5 592 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 ESPNLQ6ZVH7 1005 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 OR13C5Q8NGS8 318 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 OR2T4Q8NH00 348 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 ZNF296Q8WUU4 475 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-202ENST00000375299 MS4A6EQ96DS6 147 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 GIMAP5Q96F15 307 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 SLC35A4Q96G79 324 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 HS6ST2Q96MM7 605 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 TOX2Q96NM4 488 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 CD180Q99467 661 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 ENKD1Q9H0I2 346 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 PRDM7Q9NQW5 492 aa19.63■□□□□ 0.73
UPF3A-202ENST00000375299 SIDT1Q9NXL6 827 aaKnown RBP19.63■□□□□ 0.73
UPF3A-202ENST00000375299 MDC1Q14676 2089 aaKnown RBP19.62■□□□□ 0.73
UPF3A-202ENST00000375299 CDHR4A6H8M9 788 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 PRR23D1E9PI22 279 aaPredicted RBP19.62■□□□□ 0.73
UPF3A-202ENST00000375299 CTDSPLO15194 276 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 PEX14O75381 377 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 PRR23D2P0DMB1 279 aaPredicted RBP19.62■□□□□ 0.73
UPF3A-202ENST00000375299 MPIP34949 423 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 BCL6P41182 706 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 BLVRAP53004 296 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 SLC16A1P53985 500 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 NRG3P56975 720 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 ST8SIA6P61647 398 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 COL9A2Q14055 689 aaPredicted RBP19.62■□□□□ 0.73
UPF3A-202ENST00000375299 SUZ12Q15022 739 aaKnown RBP19.62■□□□□ 0.73
UPF3A-202ENST00000375299 PUS10Q3MIT2 529 aaKnown RBP19.62■□□□□ 0.73
UPF3A-202ENST00000375299 SEZ6L2Q6UXD5 910 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 ZNF836Q6ZNA1 936 aa19.62■□□□□ 0.73
UPF3A-202ENST00000375299 KCTD20Q7Z5Y7 419 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms