RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 EXOSC1Q9Y3B2 195 aaKnown RBP11.2□□□□□ -0.62
HMGCL-202ENST00000374487 TMEM129A0AVI4 362 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 GXYLT2A0PJZ3 443 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 HYKKA2RU49 373 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 UNC119BA6NIH7 251 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 SLC30A4O14863 429 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 RGS5O15539 181 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 BRINP1O60477 761 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 SOX30O94993 753 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 CPEP16870 476 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 BMP7P18075 431 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 HTR2AP28223 471 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 GCGRP47871 477 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 RORCP51449 518 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 RUNX1T1Q06455 604 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 ELOCQ15369 112 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 EXOSC6Q5RKV6 272 aaKnown RBP11.19□□□□□ -0.62
HMGCL-202ENST00000374487 SLC22A16Q86VW1 577 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 RNF113BQ8IZP6 322 aaKnown RBP11.19□□□□□ -0.62
HMGCL-202ENST00000374487 OR52L1Q8NGH7 329 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 FAM174AQ8TBP5 190 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 TMEM239Q8WW34 195 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 RIT1Q92963 219 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 CD180Q99467 661 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 PRSS27Q9BQR3 290 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 DPH1Q9BZG8 443 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 TPK1Q9H3S4 243 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 HCN3Q9P1Z3 774 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 ZNF229Q9UJW7 825 aa11.19□□□□□ -0.62
HMGCL-202ENST00000374487 MRPS33Q9Y291 106 aaKnown RBP11.19□□□□□ -0.62
HMGCL-202ENST00000374487 ZNF670-ZNF695F2Z2N8 137 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 SRPX2O60687 465 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-202ENST00000374487 CDC123O75794 336 aaPredicted RBP11.18□□□□□ -0.62
HMGCL-202ENST00000374487 CBX7O95931 251 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 SYPP08247 313 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 IFI6P09912 130 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 IFI30P13284 250 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 RNH1P13489 461 aaKnown RBP11.18□□□□□ -0.62
HMGCL-202ENST00000374487 SEPHS1P49903 392 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 GAS1P54826 345 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 DGAT2L6Q6ZPD8 337 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 LHFPL3Q86UP9 236 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 LYSMD2Q8IV50 215 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 CLDN22Q8N7P3 220 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 POGLUT1Q8NBL1 392 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 C1GALT1C1Q96EU7 318 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 SLC38A3Q99624 504 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 TMEM27Q9HBJ8 222 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 POLE3Q9NRF9 147 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 UCKL1Q9NWZ5 548 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 SIDT1Q9NXL6 827 aaKnown RBP11.18□□□□□ -0.62
HMGCL-202ENST00000374487 QPCTLQ9NXS2 382 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 CSNK1G3Q9Y6M4 447 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 ASCC3Q8N3C0 2202 aaKnown RBP11.18□□□□□ -0.62
HMGCL-202ENST00000374487 CTDSP2O14595 271 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 FMO6PO60774 539 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 KCNK2O95069 426 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 NKX2-2O95096 273 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 MYF5P13349 255 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 MAP3K8P41279 467 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 AADACL4Q5VUY2 407 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 ARL14Q8N4G2 192 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 PFN4Q8NHR9 129 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 LMX1AQ8TE12 382 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 TCTN2Q96GX1 697 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 PEX11GQ96HA9 241 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 HS6ST2Q96MM7 605 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 MAP3K3Q99759 626 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 OR52D1Q9H346 318 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 UBQLN3Q9H347 655 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 SIAEQ9HAT2 523 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 C14orf105Q9NVL8 296 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 UGT2A1Q9Y4X1 527 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 CACNA1EQ15878 2313 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 SCN2AQ99250 2005 aa11.18□□□□□ -0.62
HMGCL-202ENST00000374487 A0A075B6Q4 140 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 SYNDIG1LA6NDD5 238 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 BOLA2-SMG1P6H3BVE0 249 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 CLDN4O14493 209 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 SLC2A10O95528 541 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 CSF2P04141 144 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 SAGP10523 405 aaPredicted RBP11.17□□□□□ -0.62
HMGCL-202ENST00000374487 GTF2E2P29084 291 aaKnown RBP11.17□□□□□ -0.62
HMGCL-202ENST00000374487 MXD1Q05195 221 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 DSG2Q14126 1118 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 NXNL2Q5VZ03 156 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 STEAP3Q658P3 488 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 C22orf42Q6IC83 251 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 SMARCD3Q6STE5 483 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 WDR88Q6ZMY6 472 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 RABEPKQ7Z6M1 372 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 GKN2Q86XP6 184 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 CPOQ8IVL8 374 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 POC5Q8NA72 575 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 OR4F15Q8NGB8 312 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 FANK1Q8TC84 345 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 UFD1Q92890 307 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 NACC2Q96BF6 587 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 BPIFA2Q96DR5 249 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 TRMT61AQ96FX7 289 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms