RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 MGAT3Q09327 533 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 PAN3Q58A45 887 aaKnown RBP13.47□□□□□ -0.25
TRAF1-201ENST00000373887 BPHLQ86WA6 291 aaPredicted RBP13.47□□□□□ -0.25
TRAF1-201ENST00000373887 ULBP3Q9BZM4 244 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 ATG4BQ9Y4P1 393 aa13.47□□□□□ -0.25
TRAF1-201ENST00000373887 HEMK1Q9Y5R4 338 aaPredicted RBP13.47□□□□□ -0.25
TRAF1-201ENST00000373887 FAM189A1O60320 539 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 HBQ1P09105 142 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 CTSCP53634 463 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 CTBSQ01459 385 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 SMAD2Q15796 467 aaKnown RBP13.46□□□□□ -0.25
TRAF1-201ENST00000373887 RETREG1Q9H6L5 497 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 CACNG2Q9Y698 323 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 SEC61A1P61619 476 aaKnown RBP13.46□□□□□ -0.25
TRAF1-201ENST00000373887 LTC4SQ16873 150 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 PRAMEF8Q5VWM4 474 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 PRAMEF7Q5VXH5 474 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 SLC7A5P1Q8MH63 180 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 IL17RDQ8NFM7 739 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 BEST4Q8NFU0 473 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 OR4K15Q8NH41 348 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 FRS2Q8WU20 508 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 TAAR8Q969N4 342 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 ECHDC3Q96DC8 303 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 DAZAP1Q96EP5 407 aaKnown RBP13.46□□□□□ -0.25
TRAF1-201ENST00000373887 TXNDC15Q96J42 360 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 ALG8Q9BVK2 526 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 A0A0J9YY10 115 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 GCH1P30793 250 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 TSFMP43897 325 aaKnown RBP13.46□□□□□ -0.25
TRAF1-201ENST00000373887 SUOXP51687 545 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 SFRP5Q5T4F7 317 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 OR5M10Q6IEU7 315 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 CNIH2Q6PI25 160 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 DPPA4Q7L190 304 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 ITFG2Q969R8 447 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 ACKR4Q9NPB9 350 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 AIG1Q9NVV5 245 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 CITO14578 2027 aa13.46□□□□□ -0.25
TRAF1-201ENST00000373887 A6NIN4 97 aa13.46□□□□□ -0.26
TRAF1-201ENST00000373887 EMP2P54851 167 aa13.46□□□□□ -0.26
TRAF1-201ENST00000373887 COQ5Q5HYK3 327 aa13.46□□□□□ -0.26
TRAF1-201ENST00000373887 CDHR3Q6ZTQ4 885 aa13.46□□□□□ -0.26
TRAF1-201ENST00000373887 ZFP82Q8N141 532 aa13.46□□□□□ -0.26
TRAF1-201ENST00000373887 SDR9C7Q8NEX9 313 aa13.46□□□□□ -0.26
TRAF1-201ENST00000373887 SUCNR1Q9BXA5 334 aa13.46□□□□□ -0.26
TRAF1-201ENST00000373887 CEBPZOSA8MTT3 80 aa13.46□□□□□ -0.26
TRAF1-201ENST00000373887 TDGQ13569 410 aa13.46□□□□□ -0.26
TRAF1-201ENST00000373887 GPR50Q13585 617 aa13.46□□□□□ -0.26
TRAF1-201ENST00000373887 VWA5B2Q8N398 1253 aa13.46□□□□□ -0.26
TRAF1-201ENST00000373887 INPP5KQ9BT40 448 aa13.46□□□□□ -0.26
TRAF1-201ENST00000373887 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 PLCH1Q4KWH8 1693 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 FAM155AB1AL88 458 aaPredicted RBP13.45□□□□□ -0.26
TRAF1-201ENST00000373887 MT-ND4P03905 459 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 RAB3AP20336 220 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 HOXD9P28356 352 aaPredicted RBP13.45□□□□□ -0.26
TRAF1-201ENST00000373887 ARHGAP19Q14CB8 494 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 SLC5A8Q8N695 610 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 OR5D16Q8NGK9 328 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 RSC1A1Q92681 617 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 FUBP1Q96AE4 644 aaKnown RBP13.45□□□□□ -0.26
TRAF1-201ENST00000373887 HRH4Q9H3N8 390 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 TAAR2Q9P1P5 351 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 CPNE7Q9UBL6 633 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 M0R3H8 397 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 IMPA2O14732 288 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 ETV4P43268 484 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 HABP2Q14520 560 aaPredicted RBP13.45□□□□□ -0.26
TRAF1-201ENST00000373887 PARM1Q6UWI2 310 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 COMMD6Q7Z4G1 85 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 ZNF440Q8IYI8 595 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 ENDOVQ8N8Q3 282 aaKnown RBP13.45□□□□□ -0.26
TRAF1-201ENST00000373887 GOLM1Q8NBJ4 401 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 TRUB1Q8WWH5 349 aaKnown RBP13.45□□□□□ -0.26
TRAF1-201ENST00000373887 CHFRQ96EP1 664 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 SLC22A12Q96S37 553 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 OR6C2Q9NZP2 312 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 A0A1W2PPV4 95 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 HTR6P50406 440 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 AFF3P51826 1226 aaKnown RBP13.45□□□□□ -0.26
TRAF1-201ENST00000373887 HEPHL1Q6MZM0 1159 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 NETO1Q8TDF5 533 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 TRMT2BQ96GJ1 504 aaKnown RBP13.45□□□□□ -0.26
TRAF1-201ENST00000373887 CTRCQ99895 268 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 PDE4DIPQ5VU43 2346 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 GABARAPL2P60520 117 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 MLF2Q15773 248 aaPredicted RBP13.45□□□□□ -0.26
TRAF1-201ENST00000373887 C3orf38Q5JPI3 329 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 CST9LP1Q5W188 147 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 CD163Q86VB7 1156 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 RHEBL1Q8TAI7 183 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 DTD2Q96FN9 168 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 TSTD3H0UI37 97 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 XCR1P46094 333 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 RGRP47804 291 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 OR1D4P47884 311 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 EPHA4P54764 986 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 ERVPABLB-1P60509 514 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 ZNF33BQ06732 778 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms