RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 PRRT1Q99946 306 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 SLC17A9Q9BYT1 436 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 GPATCH2Q9NW75 528 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 CCDC163A0A0D9SF12 145 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 LATO43561 262 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 RAB3DO95716 219 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 SERPINA7P05543 415 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 ZDHHC11BP0C7U3 371 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 NKX3-2P78367 333 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 EIF2B1Q14232 305 aaKnown RBP13.36□□□□□ -0.27
LMX1B-202ENST00000373474 HTR3DQ70Z44 454 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 LILRA2Q8N149 483 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 OR5D16Q8NGK9 328 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 GAB3Q8WWW8 586 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 PGAM5Q96HS1 289 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 IL23AQ9NPF7 189 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 CSF2RAP15509 400 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 ITGB7P26010 798 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 RUNX3Q13761 415 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 ZC3H14Q6PJT7 736 aaKnown RBP13.36□□□□□ -0.27
LMX1B-202ENST00000373474 OR2T11Q8NH01 316 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 SMAP2Q8WU79 429 aaPredicted RBP13.36□□□□□ -0.27
LMX1B-202ENST00000373474 ASB11Q8WXH4 323 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 ISL2Q96A47 359 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 SAP130Q9H0E3 1048 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 FBRSQ9HAH7 460 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 LHX3Q9UBR4 397 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 TRAV18A0A075B6X5 111 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 CAV2P51636 162 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 PSPHP78330 225 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 ZNF585AQ6P3V2 769 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 LACC1Q8IV20 430 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 PELI3Q8N2H9 469 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 CDRT4Q8N9R6 151 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 PEX11GQ96HA9 241 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 ZNF442Q9H7R0 627 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 AHDC1Q5TGY3 1603 aaPredicted RBP13.36□□□□□ -0.27
LMX1B-202ENST00000373474 SYPP08247 313 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 CTXN1P60606 82 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 PIP5KL1Q5T9C9 394 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 ZNF695Q8IW36 515 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 DNAJA3Q96EY1 480 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 CNTNAP3Q9BZ76 1288 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 SLC25A31Q9H0C2 315 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 KCNIP1Q9NZI2 227 aa13.36□□□□□ -0.27
LMX1B-202ENST00000373474 TFAP2AP05549 437 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 MLLT11Q13015 90 aaPredicted RBP13.35□□□□□ -0.27
LMX1B-202ENST00000373474 TP53I3Q53FA7 332 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 C6orf132Q5T0Z8 1188 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 C17orf99Q6UX52 265 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 SLC39A5Q6ZMH5 540 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 UBTD2Q8WUN7 234 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 TMEM239Q8WW34 195 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 ZFYVE21Q9BQ24 234 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 SLC19A3Q9BZV2 496 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 ARPC1BO15143 372 aaKnown RBP13.35□□□□□ -0.27
LMX1B-202ENST00000373474 CCNOP22674 350 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 RGRP47804 291 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 TMEM164Q5U3C3 297 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 C12orf76Q8N812 135 aaPredicted RBP13.35□□□□□ -0.27
LMX1B-202ENST00000373474 FNDC9Q8TBE3 224 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 TRMT2BQ96GJ1 504 aaKnown RBP13.35□□□□□ -0.27
LMX1B-202ENST00000373474 SLC39A13Q96H72 371 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 MYADMQ96S97 322 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 CSNK1G3Q9Y6M4 447 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 RAC2P15153 192 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 CSNK2A1P68400 391 aaPredicted RBP13.35□□□□□ -0.27
LMX1B-202ENST00000373474 ARHGAP19Q14CB8 494 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 CSNK2A3Q8NEV1 391 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 DDIT4LQ96D03 193 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 C1orf105O95561 183 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 GAAP10253 952 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 NADSYN1Q6IA69 706 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 TANGO2Q6ICL3 276 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 RETREG3Q86VR2 466 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 ADAMTS16Q8TE57 1224 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 DTD2Q96FN9 168 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 NAA50Q9GZZ1 169 aaKnown RBP13.35□□□□□ -0.27
LMX1B-202ENST00000373474 DNTTIP1Q9H147 329 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 ACOT8O14734 319 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 AGPAT2O15120 278 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 IL1RNP18510 177 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 PODNL1Q6PEZ8 512 aa13.35□□□□□ -0.27
LMX1B-202ENST00000373474 DUX1O43812 170 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 HPGDSO60760 199 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 JUNDP17535 347 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 NUDT1P36639 197 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 PRLHRP49683 370 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 SELENOVP59797 346 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 RPL23AP62750 156 aaKnown RBP13.34□□□□□ -0.27
LMX1B-202ENST00000373474 HIST2H3PS2Q5TEC6 136 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 ZNF679Q8IYX0 411 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 PGBD5Q8N414 524 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 MITD1Q8WV92 249 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 TANKQ92844 425 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 TAAR8Q969N4 342 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 FOXRED1Q96CU9 486 aaPredicted RBP13.34□□□□□ -0.27
LMX1B-202ENST00000373474 TCEAL2Q9H3H9 227 aaPredicted RBP13.34□□□□□ -0.27
LMX1B-202ENST00000373474 RNF186Q9NXI6 227 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 TIMP2P16035 220 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms