RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 GNG10P50151 68 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 RHOAP61586 193 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 TLE2Q04725 743 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 PDZK1IP1Q13113 114 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 UGT8Q16880 541 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 ATP6AP1LQ52LC2 224 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 USP39Q53GS9 565 aaKnown RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 C10orf91Q5T1B1 145 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 ATXN7L2Q5T6C5 722 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 PLAG1Q6DJT9 500 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 SLC39A5Q6ZMH5 540 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 Q6ZNB5 142 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 TRIM46Q7Z4K8 759 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 HJURPQ8NCD3 748 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 CD200R1Q8TD46 325 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 ALG14Q96F25 216 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 MISP3Q96FF7 219 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 ZNF558Q96NG5 402 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 C1QTNF3Q9BXJ4 246 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 SEMA4BQ9NPR2 832 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 DMRT3Q9NQL9 472 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 TAS2R3Q9NYW6 316 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 CARHSP1Q9Y2V2 147 aaKnown RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 MKI67P46013 3256 aaKnown RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 TMEM218A2RU14 115 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 ACOD1A6NK06 481 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 COLCA2A8K830 154 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 ZNF197O14709 1029 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 OIP5O43482 229 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 PRAMEF12O95522 483 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 CRYABP02511 175 aaKnown RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 TCRBP04435 133 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 LINC00032P0C843 101 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 ZNF44P15621 663 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 CEACAM6P40199 344 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 PTGER3P43115 390 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 RGS4P49798 205 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 STK19P49842 368 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 EPHB3P54753 998 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 MEF2AQ02078 507 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 NTRK2Q16620 822 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 SGO1Q5FBB7 561 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 KRBOX4Q5JUW0 171 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 TXNDC8Q6A555 127 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 CNKSR3Q6P9H4 555 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 TMCO2Q7Z6W1 182 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 NUDT13Q86X67 352 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 OR10A6Q8NH74 314 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 WFDC5Q8TCV5 224 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 PROKR1Q8TCW9 393 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 EEF1AKMT1Q8WVE0 214 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 AUTS2Q8WXX7 1259 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 SLAMF9Q96A28 289 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 ZNF689Q96CS4 500 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 EID2BQ96D98 161 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 CCDC140Q96MF4 163 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 CDCA3Q99618 268 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 TCF25Q9BQ70 676 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 C7orf50Q9BRJ6 194 aaKnown RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 ABCG5Q9H222 651 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 OR6C2Q9NZP2 312 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 IL17CQ9P0M4 197 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 INSL5Q9Y5Q6 135 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 URADA6NGE7 173 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 NCF1BA6NI72 391 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 NCF1CA8MVU1 366 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 FAM220BPB1ANY3 271 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 K7ERQ8 282 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 TMPRSS2O15393 492 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 UGDHO60701 494 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 GALR3O60755 368 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 KLHL18O94889 574 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 ESR1P03372 595 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 OR8U8P0C7N1 319 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 PIPP12273 146 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 TYRP14679 529 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 ADH7P40394 386 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 CRATP43155 626 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 AGTR2P50052 363 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 CASP9P55211 416 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 ITGA1P56199 1179 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 CACNG1Q06432 222 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 FOXO1Q12778 655 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 MAD2L1Q13257 205 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 TMEM255AQ5JRV8 349 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 MANEAQ5SRI9 462 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 LIPNQ5VXI9 398 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 ZNF660Q6AZW8 331 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 Q6ZPB1 254 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 TMUB2Q71RG4 321 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 COMTD1Q86VU5 262 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 ARL14EPQ8N8R7 260 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 ZNF383Q8NA42 475 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 DCAF4L2Q8NA75 395 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 NAXEQ8NCW5 288 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 BEST4Q8NFU0 473 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 HSD17B8Q92506 261 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 LINGO1Q96FE5 620 aa8.25□□□□□ -1.09
ATG4A-203ENST00000372232 ELF4Q99607 663 aaPredicted RBP8.25□□□□□ -1.09
ATG4A-203ENST00000372232 PRDM14Q9GZV8 571 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms