RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 TRAPPC13A5PLN9 417 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 TGFBR3LH3BV60 316 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 J3QLW9 94 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 SLC30A4O14863 429 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 KHNYNO15037 678 aaKnown RBP10.88□□□□□ -0.67
PDE6C-201ENST00000371447 HPGDP15428 266 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 ZNF19P17023 458 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 TCEA1P23193 301 aaKnown RBP10.88□□□□□ -0.67
PDE6C-201ENST00000371447 SLC1A3P43003 542 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 RHAGQ02094 409 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 PRICKLE4Q2TBC4 344 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 ARHGAP11BQ3KRB8 267 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 MBOAT2Q6ZWT7 520 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 SYT9Q86SS6 491 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 CDRT4Q8N9R6 151 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 FAM98AQ8NCA5 519 aaKnown RBP10.88□□□□□ -0.67
PDE6C-201ENST00000371447 NT5CQ8TCD5 201 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 ANKRD9Q96BM1 317 aaPredicted RBP10.88□□□□□ -0.67
PDE6C-201ENST00000371447 BEX2Q9BXY8 128 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 TMEM27Q9HBJ8 222 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 POT1Q9NUX5 634 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 UCKL1Q9NWZ5 548 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 ZNF346Q9UL40 294 aaKnown RBP10.88□□□□□ -0.67
PDE6C-201ENST00000371447 GRIP1Q9Y3R0 1128 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 FREM2Q5SZK8 3169 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 SNTNA6NMZ2 147 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 SURF4O15260 269 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 KCNK2O95069 426 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 IGKV1D-16P01601 117 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 ZGLP1P0C6A0 271 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 UGT2B10P36537 528 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 ARL4DP49703 201 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 RAB25P57735 213 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 RPL6Q02878 288 aaKnown RBP10.88□□□□□ -0.67
PDE6C-201ENST00000371447 ZNHIT3Q15649 155 aaPredicted RBP10.88□□□□□ -0.67
PDE6C-201ENST00000371447 BAK1Q16611 211 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 OCLNQ16625 522 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 ALG10BQ5I7T1 473 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 MEDAGQ5VYS4 303 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 RASSF6Q6ZTQ3 369 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 C19orf47Q8N9M1 422 aaKnown RBP10.88□□□□□ -0.67
PDE6C-201ENST00000371447 SDR9C7Q8NEX9 313 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 GPBAR1Q8TDU6 330 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 ZMYND19Q96E35 227 aaPredicted RBP10.88□□□□□ -0.67
PDE6C-201ENST00000371447 BCL7BQ9BQE9 202 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 TAPBPLQ9BX59 468 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 MMP28Q9H239 520 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 RPS6KB2Q9UBS0 482 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 DIMT1Q9UNQ2 313 aaKnown RBP10.88□□□□□ -0.67
PDE6C-201ENST00000371447 ADAM18Q9Y3Q7 739 aa10.88□□□□□ -0.67
PDE6C-201ENST00000371447 A0A1B0GWA3 101 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 DAPL1A0PJW8 107 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 C4orf47A7E2U8 309 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 TNFRSF10CO14798 259 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 CBX7O95931 251 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 NID1P14543 1247 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 BMP8BP34820 402 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 MLLT3P42568 568 aaPredicted RBP10.87□□□□□ -0.67
PDE6C-201ENST00000371447 TMED10P49755 219 aaKnown RBP10.87□□□□□ -0.67
PDE6C-201ENST00000371447 YPEL5P62699 121 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 LYPD4Q6UWN0 246 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 BMP8AQ7Z5Y6 402 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 NRARPQ7Z6K4 114 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 ZNF321PQ8N8H1 164 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 RCBTB1Q8NDN9 531 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 OR5M3Q8NGP4 307 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 AHCYL2Q96HN2 611 aaKnown RBP10.87□□□□□ -0.67
PDE6C-201ENST00000371447 MSLNLQ96KJ4 702 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 HSPA12BQ96MM6 686 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 KCTD7Q96MP8 289 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 TBCCD1Q9NVR7 557 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 PCOLCE2Q9UKZ9 415 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 B3GNT3Q9Y2A9 372 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 MED31Q9Y3C7 131 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 TMEM184BQ9Y519 407 aaPredicted RBP10.87□□□□□ -0.67
PDE6C-201ENST00000371447 IGHV5-51A0A0C4DH38 117 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 FABP12A6NFH5 140 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 SYT5O00445 386 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 APOA1P02647 267 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 CRMP1Q14194 572 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 PRPF38BQ5VTL8 546 aaKnown RBP10.87□□□□□ -0.67
PDE6C-201ENST00000371447 THOC7Q6I9Y2 204 aaKnown RBP10.87□□□□□ -0.67
PDE6C-201ENST00000371447 CHRDL2Q6WN34 429 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 NCCRP1Q6ZVX7 275 aaPredicted RBP10.87□□□□□ -0.67
PDE6C-201ENST00000371447 GDPD3Q7L5L3 318 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 PPP1R14BQ96C90 147 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 DMRTB1Q96MA1 342 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 DGAT2Q96PD7 388 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 C8orf33Q9H7E9 229 aaPredicted RBP10.87□□□□□ -0.67
PDE6C-201ENST00000371447 PRTFDC1Q9NRG1 225 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 FBXL21Q9UKT6 434 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 MTCH2Q9Y6C9 303 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 NCOR1O75376 2440 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 A0A1B0GVT2 93 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 CDHR4A6H8M9 788 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 BLOC1S5-TXNDC5H3BN57 136 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 NUDT14O95848 222 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 WNT1P04628 370 aa10.87□□□□□ -0.67
PDE6C-201ENST00000371447 DBIP07108 87 aaKnown RBP10.87□□□□□ -0.67
PDE6C-201ENST00000371447 PROS1P07225 676 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms