RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 LKAAEAR1Q8TD35 194 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 SLC38A5Q8WUX1 472 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 ZBTB8AQ96BR9 441 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 BMFQ96LC9 184 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 SYT3Q9BQG1 590 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 PDE7BQ9NP56 450 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 LHX3Q9UBR4 397 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 CHD4Q14839 1912 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 TRAV27A0A087WT01 109 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 C1orf105O95561 183 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 GP2P55259 537 aaKnown RBP16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 CST6Q15828 149 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 ZNF585AQ6P3V2 769 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 DLEU7Q6UYE1 221 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 ZNF704Q6ZNC4 412 aaPredicted RBP16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 MYLIPQ8WY64 445 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 OR7D2Q96RA2 312 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 ZFYVE21Q9BQ24 234 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 GALNT9Q9HCQ5 603 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 NUMA1Q14980 2115 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 KRBOX1C9JBD0 128 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 ICMTO60725 284 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 GPX2P18283 190 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 CASRP41180 1078 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 CXADRP78310 365 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 IL13RA1P78552 427 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 XKR7Q5GH72 579 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 DPPA4Q7L190 304 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 ESX1Q8N693 406 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 PCNPQ8WW12 178 aaKnown RBP16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 MED17Q9NVC6 651 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 GLTPQ9NZD2 209 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 PPP4R1LQ9P1A2 415 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 FAM155AB1AL88 458 aaPredicted RBP16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 PNMTP11086 282 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 BMP1P13497 986 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 MEF2DQ14814 521 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 TSSK4Q6SA08 328 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 ZNF322Q6U7Q0 402 aaPredicted RBP16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 ALKAL1Q6UXT8 129 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 FCRLAQ7L513 359 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 OR6V1Q8N148 313 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 ADAMTS18Q8TE60 1221 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 NINJ1Q92982 152 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 ZDHHC12Q96GR4 267 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 ZNF582Q96NG8 517 aaPredicted RBP16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 SULT4A1Q9BR01 284 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 ZNF442Q9H7R0 627 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 FZD3Q9NPG1 666 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 LSM5Q9Y4Y9 91 aaKnown RBP16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 ANKRD34BA5PLL1 514 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 TMEM189-UBE2V1I3L0A0 370 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 FOXE1O00358 373 aaPredicted RBP16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 APBB3O95704 486 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 MPIG6BO95866 241 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 LUMP51884 338 aaPredicted RBP16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 GBX1Q14549 363 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 TMEM207Q6UWW9 146 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 SH2D5Q6ZV89 423 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 TCEAL3Q969E4 200 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 SNX11Q9Y5W9 270 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 GFRA2O00451 464 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 SNAPINO95295 136 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 BPNT1O95861 308 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 PDGFAP04085 211 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 KLK3P07288 261 aaPredicted RBP16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 HNRNPA1P09651 372 aaKnown RBP eCLIP16.07■□□□□ 0.161e-6■■■■□ 20.2
PTP4A1-201ENST00000370651 ZNF888P0CJ79 500 aaPredicted RBP16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 SNRPBP14678 240 aaKnown RBP16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 MECP2P51608 486 aaKnown RBP16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 RPS27AP62979 156 aaKnown RBP16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 UBA52P62987 128 aaKnown RBP16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 GRM7Q14831 915 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 DCST2Q5T1A1 773 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 GPR157Q5UAW9 335 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 CWH43Q9H720 699 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 VSTM2BA6NLU5 285 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 GPRIN2O60269 458 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 GAAP10253 952 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 ARNTP27540 789 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 LIPIQ6XZB0 460 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 FOXJ1Q92949 421 aa16.07■□□□□ 0.16
PTP4A1-201ENST00000370651 CLEC2LP0C7M8 214 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 GDNFP39905 211 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 C1orf61Q13536 156 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 GPR50Q13585 617 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 EIF2B1Q14232 305 aaKnown RBP16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 IRF4Q15306 451 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 MPP7Q5T2T1 576 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 PAQR8Q8TEZ7 354 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 THAP3Q8WTV1 239 aaPredicted RBP16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 MACROD1Q9BQ69 325 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 FN3KQ9H479 309 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 ZNF334Q9HCZ1 680 aaPredicted RBP16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 KCNJ16Q9NPI9 418 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 FBXO8Q9NRD0 319 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 NAALAD2Q9Y3Q0 740 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 TP53I11O14683 189 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 TGM6O95932 706 aa16.06■□□□□ 0.16
PTP4A1-201ENST00000370651 TRAPPC2P0DI81 140 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms