RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 FOLH1BQ9HBA9 442 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 ACER3Q9NUN7 267 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 CTSFQ9UBX1 484 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 C19orf25Q9UFG5 118 aaPredicted RBP8.08□□□□□ -1.12
SNX27-201ENST00000368838 FBXL4Q9UKA2 621 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 MRTO4Q9UKD2 239 aaKnown RBP8.08□□□□□ -1.12
SNX27-201ENST00000368838 B3GNT3Q9Y2A9 372 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 FAM32AQ9Y421 112 aaKnown RBP8.08□□□□□ -1.12
SNX27-201ENST00000368838 LYVE1Q9Y5Y7 322 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 MAU2Q9Y6X3 613 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 LRBAP50851 2863 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 GTF3C1Q12789 2109 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 A0A1W2PQD3 144 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 CDHR4A6H8M9 788 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 C17orf105B2RV13 164 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 FAAHO00519 579 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 SOCS2O14508 198 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 GNGT2O14610 69 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 EI24O14681 340 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 TPST1O60507 370 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 FCMRO60667 390 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 FBXO24O75426 580 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 KCNK2O95069 426 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 EPPINO95925 133 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 IGF2P01344 180 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 ITGAMP11215 1152 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 ZNF23P17027 643 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 CDH2P19022 906 aaPredicted RBP8.07□□□□□ -1.12
SNX27-201ENST00000368838 MAOAP21397 527 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 IFNA8P32881 189 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 ATP12AP54707 1039 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 EEF1A1P68104 462 aaKnown RBP8.07□□□□□ -1.12
SNX27-201ENST00000368838 ADARB1P78563 741 aaKnown RBP8.07□□□□□ -1.12
SNX27-201ENST00000368838 TEKQ02763 1124 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 MERTKQ12866 999 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 COX10Q12887 443 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 NSDHLQ15738 373 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 SYT16Q17RD7 645 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 LIN52Q52LA3 116 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 ZNF311Q5JNZ3 666 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 ZNF770Q6IQ21 691 aaPredicted RBP8.07□□□□□ -1.12
SNX27-201ENST00000368838 DGAT2L6Q6ZPD8 337 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 CARM1Q86X55 608 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 LSMEM1Q8N8F7 131 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 NFAM1Q8NET5 270 aaPredicted RBP8.07□□□□□ -1.12
SNX27-201ENST00000368838 OR52P1PQ8NH57 321 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 C16orf52Q8NHV5 167 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 CDS1Q92903 461 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 EAF1Q96JC9 268 aaPredicted RBP8.07□□□□□ -1.12
SNX27-201ENST00000368838 LCORQ96JN0 433 aaPredicted RBP8.07□□□□□ -1.12
SNX27-201ENST00000368838 PRRC1Q96M27 445 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 FER1L6-AS2Q96M78 137 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 ADI1Q9BV57 179 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 AMBRA1Q9C0C7 1298 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 SEMA6AQ9H2E6 1030 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 CACYBPQ9HB71 228 aaKnown RBP8.07□□□□□ -1.12
SNX27-201ENST00000368838 ATP13A2Q9NQ11 1180 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 EXOSC3Q9NQT5 275 aaKnown RBP8.07□□□□□ -1.12
SNX27-201ENST00000368838 TMEFF2Q9UIK5 374 aaPredicted RBP8.07□□□□□ -1.12
SNX27-201ENST00000368838 ABCG2Q9UNQ0 655 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 CHST2Q9Y4C5 530 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 AP4B1Q9Y6B7 739 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 KCNE3Q9Y6H6 103 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 CLCA3PQ9Y6N3 262 aa8.07□□□□□ -1.12
SNX27-201ENST00000368838 C2orf92A0A1B0GVN3 265 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 ANKUB1A6NFN9 424 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 IDSB3KWA1 339 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 SOCS6O14544 535 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 UGT2B17O75795 530 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 OR5F1O95221 314 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 IL33O95760 270 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 ADAP00813 363 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 MYF6P23409 242 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 AQP1P29972 269 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 GABRA3P34903 492 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 EFNA3P52797 238 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 PNLIPRP2P54317 469 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 KEAP1Q14145 624 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 ZNF267Q14586 743 aaPredicted RBP8.06□□□□□ -1.12
SNX27-201ENST00000368838 EBPQ15125 230 aaKnown RBP8.06□□□□□ -1.12
SNX27-201ENST00000368838 MICAQ29983 383 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 GPAT3Q53EU6 434 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 VWA2Q5GFL6 755 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 LINC00696Q6ZRV3 163 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 MAMDC2Q7Z304 686 aaPredicted RBP8.06□□□□□ -1.12
SNX27-201ENST00000368838 NUP54Q7Z3B4 507 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 ZNF440Q8IYI8 595 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 RNF113BQ8IZP6 322 aaKnown RBP8.06□□□□□ -1.12
SNX27-201ENST00000368838 ZADH2Q8N4Q0 377 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 DHRSXQ8N5I4 330 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 FAM71CQ8NEG0 241 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 B3GNT7Q8NFL0 401 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 GPR151Q8TDV0 419 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 FBLIM1Q8WUP2 373 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 RNF138Q8WVD3 245 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 SLC9A6Q92581 669 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 TPD52L3Q96J77 140 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 VPS50Q96JG6 964 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 ZNF570Q96NI8 536 aa8.06□□□□□ -1.12
SNX27-201ENST00000368838 GABARAPL3Q9BY60 117 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms