RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 C19orf57Q0VDD7 668 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 TOMM34Q15785 309 aaPredicted RBP12.62□□□□□ -0.39
TPM3-211ENST00000368531 IGFBP7Q16270 282 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 DUSP7Q16829 419 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 GLYATQ6IB77 296 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 GFRALQ6UXV0 394 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 CCDC121Q6ZUS5 278 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 CCDC80Q76M96 950 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 COMTD1Q86VU5 262 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 CMIPQ8IY22 773 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 TOR1AIP2Q8NFQ8 470 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 OR10Q1Q8NGQ4 319 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 OR5W2Q8NH69 310 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 OIT3Q8WWZ8 545 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 FAM162AQ96A26 154 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 C1GALT1C1Q96EU7 318 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 TPD52L3Q96J77 140 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 GPR137Q96N19 417 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 BTBD10Q9BSF8 475 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 PINK1Q9BXM7 581 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 PCDHAC1Q9H158 963 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 C1orf21Q9H246 121 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 ARMC7Q9H6L4 198 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 ZDHHC11Q9H8X9 412 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 HHATLQ9HCP6 504 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 QPCTLQ9NXS2 382 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 DNAJB12Q9NXW2 375 aaKnown RBP12.62□□□□□ -0.39
TPM3-211ENST00000368531 TNFRSF10DQ9UBN6 386 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 CD300AQ9UGN4 299 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 A0A1B0GTH9 108 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 ANKUB1A6NFN9 424 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 ADAM11O75078 769 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 ATP5HO75947 161 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 HPNP05981 417 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 LINGO3P0C6S8 592 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 PRG2P13727 222 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 HSD17B1P14061 328 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 GGT1P19440 569 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 PRKAR1BP31321 381 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 TDGF1P3P51864 188 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 CRYBA2P53672 197 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 HOXC5Q00444 222 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 CBFBQ13951 182 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 ELOAQ14241 798 aaKnown RBP12.61□□□□□ -0.39
TPM3-211ENST00000368531 QPRTQ15274 297 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 DNAL1Q4LDG9 190 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 CYBRD1Q53TN4 286 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 RNF220Q5VTB9 566 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 RAET1LQ5VY80 246 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 DHRS4L2Q6PKH6 230 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 TRILQ7L0X0 811 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 FAM71CQ8NEG0 241 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 GPR32P1Q8NGA4 272 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 ZNF563Q8TA94 476 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 VANGL1Q8TAA9 524 aaPredicted RBP12.61□□□□□ -0.39
TPM3-211ENST00000368531 GPR119Q8TDV5 335 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 RELTQ969Z4 430 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 ZNF524Q96C55 264 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 DTNBP1Q96EV8 351 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 NPAS1Q99742 590 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 SLX1AQ9BQ83 275 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 OR2B2Q9GZK3 357 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 MED17Q9NVC6 651 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 PRPF19Q9UMS4 504 aaKnown RBP12.61□□□□□ -0.39
TPM3-211ENST00000368531 SHANK1Q9Y566 2161 aa12.61□□□□□ -0.39
TPM3-211ENST00000368531 ZNF407Q9C0G0 2248 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 CFAP73A6NFT4 308 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 M0R3H8 397 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 ZNF682O95780 498 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 EPPINO95925 133 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 SERPINA1P01009 418 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 IFNA14P01570 189 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 PGCP20142 388 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 TNFRSF1BP20333 461 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 CD247P20963 164 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 KCNJ5P48544 419 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 IDH2P48735 452 aaKnown RBP12.6□□□□□ -0.39
TPM3-211ENST00000368531 RASSF2P50749 326 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 SUMO3P55854 103 aaPredicted RBP12.6□□□□□ -0.39
TPM3-211ENST00000368531 PLPPR5Q32ZL2 321 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 KRTCAP3Q53RY4 240 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 POMZP3Q6PJE2 187 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 LSRQ86X29 649 aaPredicted RBP12.6□□□□□ -0.39
TPM3-211ENST00000368531 GHDCQ8N2G8 530 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 CADM2Q8N3J6 435 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 SFXN2Q96NB2 322 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 BARD1Q99728 777 aaKnown RBP12.6□□□□□ -0.39
TPM3-211ENST00000368531 PRR14Q9BWN1 585 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 ACKR4Q9NPB9 350 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 KLHL28Q9NXS3 571 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 SPRR3Q9UBC9 169 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 SVILO95425 2214 aa12.6□□□□□ -0.39
TPM3-211ENST00000368531 GTF3C1Q12789 2109 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 COL6A6A6NMZ7 2263 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 NPIPA2E9PIF3 369 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 NPIPA3F8WFD2 350 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 PYCARD-AS1I3L0S3 204 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 DNAJC8O75937 253 aaPredicted RBP12.59□□□□□ -0.39
TPM3-211ENST00000368531 WISP1O95388 367 aa12.59□□□□□ -0.39
TPM3-211ENST00000368531 IGHG3P01860 377 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms