RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CRHP06850 196 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 CHI3L1P36222 383 aaPredicted RBP17.02■□□□□ 0.32
CKS1B-203ENST00000368439 PEX19P40855 299 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 KIR2DL2P43627 348 aaPredicted RBP17.02■□□□□ 0.32
CKS1B-203ENST00000368439 MRPL19P49406 292 aaKnown RBP17.02■□□□□ 0.32
CKS1B-203ENST00000368439 KHKP50053 298 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 RPS3AP61247 264 aaKnown RBP17.02■□□□□ 0.32
CKS1B-203ENST00000368439 FOXF1Q12946 379 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 OR2A2Q6IF42 318 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 FRRS1Q6ZNA5 592 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 C16orf62Q7Z3J2 963 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 P4HA3Q7Z4N8 544 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 RNF130Q86XS8 419 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 ZNF614Q8N883 585 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 OR9I1Q8NGQ6 314 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 STARD4Q96DR4 205 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 PIGMQ9H3S5 423 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 POLE3Q9NRF9 147 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 ARGLU1Q9NWB6 273 aaPredicted RBP17.02■□□□□ 0.32
CKS1B-203ENST00000368439 CRIM1Q9NZV1 1036 aa17.02■□□□□ 0.32
CKS1B-203ENST00000368439 A0A0J9YW62 118 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 FAM221AA4D161 298 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 GTPBP1O00178 669 aaKnown RBP17.01■□□□□ 0.31
CKS1B-203ENST00000368439 EIF1AYO14602 144 aaKnown RBP17.01■□□□□ 0.31
CKS1B-203ENST00000368439 AQP8O94778 261 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 TGDSO95455 350 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 OPN1LWP04000 364 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 UBL4AP11441 157 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 NID1P14543 1247 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 PRKCAP17252 672 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 ADH6P28332 368 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 SHC1P29353 583 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 EIF1P41567 113 aaKnown RBP17.01■□□□□ 0.31
CKS1B-203ENST00000368439 KIR2DL3P43628 341 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 SLC6A8P48029 635 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 IDH3AP50213 366 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 MVDP53602 400 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 PPP2R2AP63151 447 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 EEF1A1P68104 462 aaKnown RBP17.01■□□□□ 0.31
CKS1B-203ENST00000368439 PLAURQ03405 335 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 MYBPHQ13203 477 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 SKP2Q13309 424 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 SLC25A53Q5H9E4 307 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 EEF1A1P5Q5VTE0 462 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 VWA1Q6PCB0 445 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 ZNF621Q6ZSS3 439 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 ZZZ3Q8IYH5 903 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 TRIML2Q8N7C3 387 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 OR10D3Q8NH80 312 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 FBXO27Q8NI29 283 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 ZFP90Q8TF47 636 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 OIT3Q8WWZ8 545 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 ZG16BQ96DA0 208 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 LRRC46Q96FV0 321 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 EBF4Q9BQW3 602 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 LAT2Q9GZY6 243 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 STOML1Q9UBI4 398 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 PACSIN3Q9UKS6 424 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 WDR45Q9Y484 360 aa17.01■□□□□ 0.31
CKS1B-203ENST00000368439 HRNRQ86YZ3 2850 aaPredicted RBP17■□□□□ 0.31
CKS1B-203ENST00000368439 A8MXE2 369 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 ANKRD17O75179 2603 aaKnown RBP17■□□□□ 0.31
CKS1B-203ENST00000368439 BCAS1O75363 584 aaPredicted RBP17■□□□□ 0.31
CKS1B-203ENST00000368439 CGAP01215 116 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 CAPN3P20807 821 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 ELK4P28324 431 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 PGM1P36871 562 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 EIF1AXP47813 144 aaKnown RBP17■□□□□ 0.31
CKS1B-203ENST00000368439 POLR2JP52435 117 aaKnown RBP17■□□□□ 0.31
CKS1B-203ENST00000368439 SORDQ00796 357 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 FGFBP1Q14512 234 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 MAPK11Q15759 364 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 COX20Q5RI15 118 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 ATAD3BQ5T9A4 648 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 MSANTD1Q6ZTZ1 278 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 ESPNLQ6ZVH7 1005 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 LUZP2Q86TE4 346 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 LURAP1LQ8IV03 231 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 LILRA2Q8N149 483 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 FAM71CQ8NEG0 241 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 TOR1AIP2Q8NFQ8 470 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 OR5W2Q8NH69 310 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 RBM24Q9BX46 236 aaKnown RBP17■□□□□ 0.31
CKS1B-203ENST00000368439 TMEM185BQ9H7F4 350 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 GALNT8Q9NY28 637 aa17■□□□□ 0.31
CKS1B-203ENST00000368439 GPC6Q9Y625 555 aaPredicted RBP17■□□□□ 0.31
CKS1B-203ENST00000368439 SPG11Q96JI7 2443 aa16.99■□□□□ 0.31
CKS1B-203ENST00000368439 RFXANKO14593 260 aa16.99■□□□□ 0.31
CKS1B-203ENST00000368439 TNFSF11O14788 317 aa16.99■□□□□ 0.31
CKS1B-203ENST00000368439 CXCL13O43927 109 aa16.99■□□□□ 0.31
CKS1B-203ENST00000368439 H6PDO95479 791 aa16.99■□□□□ 0.31
CKS1B-203ENST00000368439 NUDT14O95848 222 aa16.99■□□□□ 0.31
CKS1B-203ENST00000368439 ZCCHC18P0CG32 403 aa16.99■□□□□ 0.31
CKS1B-203ENST00000368439 TXNL4AP83876 142 aaKnown RBP16.99■□□□□ 0.31
CKS1B-203ENST00000368439 CHRNEQ04844 493 aa16.99■□□□□ 0.31
CKS1B-203ENST00000368439 SYPL1Q16563 259 aa16.99■□□□□ 0.31
CKS1B-203ENST00000368439 SGCBQ16585 318 aa16.99■□□□□ 0.31
CKS1B-203ENST00000368439 BTLAQ7Z6A9 289 aa16.99■□□□□ 0.31
CKS1B-203ENST00000368439 ZNF619Q8N2I2 560 aa16.99■□□□□ 0.31
CKS1B-203ENST00000368439 MIER2Q8N344 545 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms