RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ZNF195O14628 629 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 LYPLA1O75608 230 aaPredicted RBP14.26□□□□□ -0.13
CKS1B-202ENST00000368436 ATP6V1C1P21283 382 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 ATP12AP54707 1039 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 CAPRIN1Q14444 709 aaKnown RBP14.26□□□□□ -0.13
CKS1B-202ENST00000368436 TMEM201Q5SNT2 666 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.26□□□□□ -0.13
CKS1B-202ENST00000368436 TFAP2EQ6VUC0 442 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 NUFIP2Q7Z417 695 aaKnown RBP14.26□□□□□ -0.13
CKS1B-202ENST00000368436 PRIMA1Q86XR5 153 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 OR56A1Q8NGH5 318 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 FBXO27Q8NI29 283 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 GPR119Q8TDV5 335 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 ADAMTS15Q8TE58 950 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 S100PBPQ96BU1 408 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 CXorf56Q9H5V9 222 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 KLHL13Q9P2N7 655 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 CARD8Q9Y2G2 431 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 SNX8Q9Y5X2 465 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 KCNE3Q9Y6H6 103 aa14.26□□□□□ -0.13
CKS1B-202ENST00000368436 USF3Q68DE3 2245 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 NPIPA5A0A0B4J1W7 369 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 GJE1A6NN92 205 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 NPIPA7E9PJI5 369 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 H3BNH8 94 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 PEX11AO75192 247 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 PRKD3O94806 890 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 NTN1O95631 604 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 KRT16P08779 473 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 NPIPA8P0DM63 369 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 PRKCAP17252 672 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 PTGR1Q14914 329 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 TOMM34Q15785 309 aaPredicted RBP14.25□□□□□ -0.13
CKS1B-202ENST00000368436 LSM12Q3MHD2 195 aaKnown RBP14.25□□□□□ -0.13
CKS1B-202ENST00000368436 SLC25A53Q5H9E4 307 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 C6orf136Q5SQH8 315 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 DCST2Q5T1A1 773 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 SFRP5Q5T4F7 317 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 FCRLAQ7L513 359 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 TUSC5Q8IXB3 177 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 LILRB1Q8NHL6 650 aaPredicted RBP14.25□□□□□ -0.13
CKS1B-202ENST00000368436 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.25□□□□□ -0.13
CKS1B-202ENST00000368436 AKAP1Q92667 903 aaKnown RBP eCLIP14.25□□□□□ -0.13
CKS1B-202ENST00000368436 ZNF524Q96C55 264 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 CHMP6Q96FZ7 201 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 REXO5Q96IC2 774 aaKnown RBP14.25□□□□□ -0.13
CKS1B-202ENST00000368436 C3orf30Q96M34 536 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 MECRQ9BV79 373 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 COQ10BQ9H8M1 238 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 ATAD3AQ9NVI7 634 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 FAF1Q9UNN5 650 aaPredicted RBP14.25□□□□□ -0.13
CKS1B-202ENST00000368436 DTNAQ9Y4J8 743 aa14.25□□□□□ -0.13
CKS1B-202ENST00000368436 TLN2Q9Y4G6 2542 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 ZANQ9Y493 2812 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 ESPNB1AK53 854 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 ETV2O00321 342 aaPredicted RBP14.24□□□□□ -0.13
CKS1B-202ENST00000368436 NUDT14O95848 222 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 C6orf47O95873 294 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 YES1P07947 543 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 PCSK6P29122 969 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 ARRB2P32121 409 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 SERPINB5P36952 375 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 TP53BP2Q13625 1128 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 TMEM176BQ3YBM2 270 aaPredicted RBP14.24□□□□□ -0.13
CKS1B-202ENST00000368436 ATP6AP1LQ52LC2 224 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 IL23RQ5VWK5 629 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 RIMKLAQ8IXN7 391 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 SLC43A2Q8N370 569 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 RAB3IL1Q8TBN0 382 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 SFXN5Q8TD22 340 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 MOAP1Q96BY2 351 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 MRGPRX4Q96LA9 322 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 USB1Q9BQ65 265 aaKnown RBP14.24□□□□□ -0.13
CKS1B-202ENST00000368436 TACO1Q9BSH4 297 aaKnown RBP14.24□□□□□ -0.13
CKS1B-202ENST00000368436 BHLHE41Q9C0J9 482 aaPredicted RBP14.24□□□□□ -0.13
CKS1B-202ENST00000368436 ANKZF1Q9H8Y5 726 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 SLC17A7Q9P2U7 560 aa14.24□□□□□ -0.13
CKS1B-202ENST00000368436 CSPG4Q6UVK1 2322 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 TLDC2A0PJX2 215 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 ZNF814B7Z6K7 855 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 OVOL3O00110 214 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 GTPBP1O00178 669 aaKnown RBP14.23□□□□□ -0.13
CKS1B-202ENST00000368436 EIF4E2O60573 245 aaKnown RBP14.23□□□□□ -0.13
CKS1B-202ENST00000368436 SLU7O95391 586 aaKnown RBP14.23□□□□□ -0.13
CKS1B-202ENST00000368436 PRPS1L1P21108 318 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 RNF144AP50876 292 aaPredicted RBP14.23□□□□□ -0.13
CKS1B-202ENST00000368436 ATP5J2P56134 94 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 C21orf58P58505 322 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 SELENBP1Q13228 472 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 P2RY6Q15077 328 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 TSC22D1Q15714 1073 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 TAB1Q15750 504 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 NDUFAF6Q330K2 333 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 SPDYE7PQ495Y7 208 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 NCMAPQ5T1S8 102 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 RIBC1Q8N443 379 aaPredicted RBP14.23□□□□□ -0.13
CKS1B-202ENST00000368436 KRTCAP2Q8N6L1 136 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 OR5W2Q8NH69 310 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 AGR3Q8TD06 166 aa14.23□□□□□ -0.13
CKS1B-202ENST00000368436 ZFP90Q8TF47 636 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms