RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PLAURQ03405 335 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 TMEM92Q6UXU6 159 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 PPP1R3EQ9H7J1 279 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 MOV10Q9HCE1 1003 aaKnown RBP16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 BABAM2Q9NXR7 383 aa16.77■□□□□ 0.28
UBQLN4-201ENST00000368309 ATG2AQ2TAZ0 1938 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 DAPL1A0PJW8 107 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 J3QRE1 110 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 CELA2BP08218 269 aaPredicted RBP16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 NOS3P29474 1203 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 LBX1P52954 281 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 FOXK2Q01167 660 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 BCL2A1Q16548 175 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 PRICKLE4Q2TBC4 344 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 DEFB110Q30KQ9 67 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 FAM27D1Q5T7N8 215 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 PRPF38BQ5VTL8 546 aaKnown RBP16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 NR2C2APQ86WQ0 139 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 SLC37A3Q8NCC5 494 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 CNOT9Q92600 299 aaKnown RBP16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 PTCHD1Q96NR3 888 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 PPIL3Q9H2H8 161 aaKnown RBP16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 B3GAT2Q9NPZ5 323 aa16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 MEPEQ9NQ76 525 aaPredicted RBP16.77■□□□□ 0.27
UBQLN4-201ENST00000368309 MYO15AQ9UKN7 3530 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 E9PI62 339 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 GTPBP1O00178 669 aaKnown RBP16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 LYPD3O95274 346 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 ATP1B1P05026 303 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 GYPBP06028 91 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 TPMTP51580 245 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 C19orf18Q8NEA5 215 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 ENKURQ8TC29 256 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 DUSP22Q9NRW4 184 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 CPNE7Q9UBL6 633 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 A6NL46 340 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 RNF13O43567 381 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 PLOD3O60568 738 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 TYRP1P17643 537 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 MYL9P24844 172 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 EVX1P49640 407 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 ILF3Q12906 894 aaKnown RBP eCLIP16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 ZFP69Q49AA0 526 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 IDNKQ5T6J7 187 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 TRIQKQ629K1 86 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 CDK20Q8IZL9 346 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 CDCA3Q99618 268 aaPredicted RBP16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 TTYH2Q9BSA4 534 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 SPACA6W5XKT8 324 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 A0A0B4J293 547 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 RPS4Y1P22090 263 aaKnown RBP16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 MGAT2Q10469 447 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 LCN1P1Q5VSP4 162 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 ARL9Q6T311 187 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 GID4Q8IVV7 300 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 VWA5B2Q8N398 1253 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 CSNK1A1LQ8N752 337 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 OR4N2Q8NGD1 307 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 RNF31Q96EP0 1072 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 LYRM4Q9HD34 91 aa16.76■□□□□ 0.27
UBQLN4-201ENST00000368309 A0A1B0GVC2 190 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 A6NIN4 97 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 FAM25AB3EWG3 89 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 FAM25CB3EWG5 89 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 FAM25GB3EWG6 89 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 GNB5O14775 395 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 ADAM11O75078 769 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 CHRNB1P11230 501 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 ACSM1Q08AH1 577 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 LNX2Q8N448 690 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 BAHD1Q8TBE0 780 aaPredicted RBP16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 FYTTD1Q96QD9 318 aaKnown RBP16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 TEAD3Q99594 435 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 TTTY10Q9BZA0 68 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 IL21RQ9HBE5 538 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 MED31Q9Y3C7 131 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 CLCA3PQ9Y6N3 262 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 PSKH1P11801 424 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 BMP8BP34820 402 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 POU6F2P78424 691 aaPredicted RBP16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 MRPS15P82914 257 aaKnown RBP16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 BMP8AQ7Z5Y6 402 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 OR13H1Q8NG92 308 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 OR52R1Q8NGF1 315 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 TP53INP1Q96A56 240 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 FRMD6Q96NE9 622 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 DEPDC7Q96QD5 511 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 SMAD5Q99717 465 aaKnown RBP16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 RNF121Q9H920 327 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 RANGRFQ9HD47 186 aaPredicted RBP16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 ASB6Q9NWX5 421 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 ITGB1BP2Q9UKP3 347 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 SIGLEC7Q9Y286 467 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 SPEGQ15772 3267 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 BRWD1Q9NSI6 2320 aa16.75■□□□□ 0.27
UBQLN4-201ENST00000368309 PRR23D1E9PI22 279 aaPredicted RBP16.74■□□□□ 0.27
UBQLN4-201ENST00000368309 RDH16O75452 317 aa16.74■□□□□ 0.27
UBQLN4-201ENST00000368309 PRR23D2P0DMB1 279 aaPredicted RBP16.74■□□□□ 0.27
UBQLN4-201ENST00000368309 SHC1P29353 583 aa16.74■□□□□ 0.27
UBQLN4-201ENST00000368309 IL20RBQ6UXL0 311 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms