RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 SLC38A5Q8WUX1 472 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 ASB5Q8WWX0 329 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 ZBTB8AQ96BR9 441 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 ARSGQ96EG1 525 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 UCN2Q96RP3 112 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 LAT2Q9GZY6 243 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 IKZF5Q9H5V7 419 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 CALHM2Q9HA72 323 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 P2RX2Q9UBL9 471 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 MBD3L4A6NDZ8 208 aaPredicted RBP20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 MBD3L3A6NE82 208 aaPredicted RBP20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 MBD3L5A6NJ08 208 aaPredicted RBP20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 PRSS44E7EML9 344 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 CSTAP01040 98 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 POU3F2P20265 443 aaPredicted RBP20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 HTR1EP28566 365 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 TIMP3P35625 211 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 CLDN20P56880 219 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 HPCAP84074 193 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 SF3B4Q15427 424 aaKnown RBP eCLIP20.23■□□□□ 0.831e-9■■■■■ 43.2
ECHDC1-203ENST00000368291 UBQLNLQ8IYU4 475 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 DPP10Q8N608 796 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 OR5W2Q8NH69 310 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 MBD3L2Q8NHZ7 208 aaPredicted RBP20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 CA5BP1Q8WTZ4 195 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 RNF145Q96MT1 663 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 SAR1AQ9NR31 198 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 CLCF1Q9UBD9 225 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 LEF1Q9UJU2 399 aaPredicted RBP20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 NDUFAF1Q9Y375 327 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 DSPPQ9NZW4 1301 aa20.23■□□□□ 0.83
ECHDC1-203ENST00000368291 AGAP5A6NIR3 686 aa20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 CLCA1A8K7I4 914 aa20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 DYNC1I1O14576 645 aa20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 BCHEP06276 602 aa20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 SNRPB2P08579 225 aaKnown RBP20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 KCNJ10P78508 379 aa20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 FADDQ13158 208 aa20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 POMZP3Q6PJE2 187 aa20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 EIF3MQ7L2H7 374 aaKnown RBP20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 GGNQ86UU5 652 aa20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 C9orf106Q8NAJ2 232 aa20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 UCK2Q9BZX2 261 aa20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 MTHFD2LQ9H903 347 aaPredicted RBP20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 AP4B1Q9Y6B7 739 aa20.22■□□□□ 0.83
ECHDC1-203ENST00000368291 CYSRT1A8MQ03 144 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 C19orf84I3L1E1 186 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 EFNA2O43921 213 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 NTN1O95631 604 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 NUDT14O95848 222 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 UBTFL6P0CB48 400 aaPredicted RBP20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 PRKCAP17252 672 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 IL11P20809 199 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 FOXF1Q12946 379 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 TOR1AIP2Q8NFQ8 470 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 PMM1Q92871 262 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 MAL2Q969L2 176 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 TMEM19Q96HH6 336 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 THUMPD3Q9BV44 507 aaKnown RBP20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 SLC35A3Q9Y2D2 325 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 ETV2O00321 342 aaPredicted RBP20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 FBP2O00757 339 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 SEC14L5O43304 696 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 ADAM11O75078 769 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 CYP7B1O75881 506 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 GPX2P18283 190 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 ZNF136P52737 540 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 TFF3Q07654 80 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 KLF10Q13118 480 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 RUNDC3AQ59EK9 446 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 SLC25A53Q5H9E4 307 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 RPS26P11Q5JNZ5 115 aaPredicted RBP20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 SP5Q6BEB4 398 aaPredicted RBP20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 MEIOBQ8N635 442 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 TMCO5AQ8N6Q1 288 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 SMPDL3BQ92485 455 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 TREX2Q9BQ50 279 aaPredicted RBP20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 CPPED1Q9BRF8 314 aaPredicted RBP20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 RAD21L1Q9H4I0 556 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 A4GALTQ9NPC4 353 aa20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 THUMPD1Q9NXG2 353 aaKnown RBP20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 GPC6Q9Y625 555 aaPredicted RBP20.21■□□□□ 0.83
ECHDC1-203ENST00000368291 NKX2-6A6NCS4 301 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 FAM90A27PA6NNH2 459 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 FAM47E-STBD1D6RA91 191 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 ANGPT2O15123 496 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 TGM6O95932 706 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 ADH6P28332 368 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 EIF1P41567 113 aaKnown RBP20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 CCR4P51679 360 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 SEC24CP53992 1094 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 CRISP3P54108 245 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 GYS2P54840 703 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 RAC1P63000 192 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 CBFBQ13951 182 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 QPRTQ15274 297 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 CTU2Q2VPK5 515 aaKnown RBP20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 CRYBG3Q68DQ2 2970 aa20.2■□□□□ 0.82
ECHDC1-203ENST00000368291 DHDDSQ86SQ9 333 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms