RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 LOC100131303A0A0U1RQF7 123 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 G3V4G9 280 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 NOL3O60936 208 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 KRT8P05787 483 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 TBXA2RP21731 343 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 ADORA2BP29275 332 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 DRD3P35462 400 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 HPCAL1P37235 193 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 OR3A4PP47883 348 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 RPS8P62241 208 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 MRPS11P82912 194 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 SELPLGQ14242 412 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 ZNF79Q15937 498 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 SLC38A6Q8IZM9 456 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 OR2T3Q8NH03 318 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 ZNF564Q8TBZ8 553 aaPredicted RBP2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 SPRYD4Q8WW59 207 aaPredicted RBP2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 FAM122AQ96E09 287 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 VPS39Q96JC1 886 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 C12orf66Q96MD2 445 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 KIR2DL4Q99706 377 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 RNF126Q9BV68 326 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 DUSP16Q9BY84 665 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 ZNF702PQ9H963 129 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 POLD4Q9HCU8 107 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 PLSCR3Q9NRY6 295 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 IL17CQ9P0M4 197 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 WRAP73Q9P2S5 460 aaPredicted RBP2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 APOBEC3BQ9UH17 382 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 SAMD4AQ9UPU9 718 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 CA5BQ9Y2D0 317 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 KIF3AQ9Y496 699 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 FLVCR1Q9Y5Y0 555 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 SPACA6W5XKT8 324 aa2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 COL4A4P53420 1690 aaPredicted RBP2.46□□□□□ -2.02
ECHDC1-201ENST00000368287 VSTM2BA6NLU5 285 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 PP2D1A8MPX8 630 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 NDC80O14777 642 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 ANGPT2O15123 496 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 HDAC3O15379 428 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 BCAS1O75363 584 aaPredicted RBP2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 SERF1AO75920 110 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 MFN2O95140 757 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 RPA2P15927 270 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 ZNF19P17023 458 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 HNF1AP20823 631 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 VDAC1P21796 283 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 RPL29P47914 159 aaKnown RBP2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 RPL32P62910 135 aaKnown RBP2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 RAB40BQ12829 278 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 MXD4Q14582 209 aaPredicted RBP2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 PRR4Q16378 134 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 PDK4Q16654 411 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 NDUFA9Q16795 377 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 ATF7IP2Q5U623 682 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 KCNIP4Q6PIL6 250 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 TRPM8Q7Z2W7 1104 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 ACOT1Q86TX2 421 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 GMCL1P1Q8NEA9 526 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 OR2A12Q8NGT7 310 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 MYLPFQ96A32 169 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 TTC25Q96NG3 672 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 OR5B2Q96R09 309 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 RIT2Q99578 217 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 MCHR1Q99705 422 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 CITED1Q99966 193 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 ALG12Q9BV10 488 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 C19orf24Q9BVV8 132 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 PPDPFQ9H3Y8 114 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 RIBC2Q9H4K1 309 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 ASB8Q9H765 288 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 RMND5AQ9H871 391 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 FARSBQ9NSD9 589 aaKnown RBP2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 ZNF221Q9UK13 617 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 PDE10AQ9Y233 779 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 OARD1Q9Y530 152 aa2.45□□□□□ -2.02
ECHDC1-201ENST00000368287 FRMPD4Q14CM0 1322 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 GSAPA4D1B5 854 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 EPOPA6NHQ4 379 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 ZFP92A6NM28 416 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 A8MUI8 341 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 H0Y9J4 135 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 OR7A17O14581 309 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 TBX19O60806 448 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 IGHV3-23P01764 117 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 UGT2B4P06133 528 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 OR8U8P0C7N1 319 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 IGLL1P15814 213 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 PGCP20142 388 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 PSMB1P20618 241 aaKnown RBP2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 CYP2B6P20813 491 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 PCMT1P22061 227 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 PSMA2P25787 234 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 PSMA5P28066 241 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 UGT1A3P35503 534 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 DHPSP49366 369 aaPredicted RBP2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 SLC26A2P50443 739 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 ARFIP1P53367 373 aa2.44□□□□□ -2.02
ECHDC1-201ENST00000368287 HSPA2P54652 639 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms