RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 RIDAP52758 137 aaKnown RBP10.93□□□□□ -0.66
COPA-202ENST00000368069 TNFRSF17Q02223 184 aa10.93□□□□□ -0.66
COPA-202ENST00000368069 GBX1Q14549 363 aa10.93□□□□□ -0.66
COPA-202ENST00000368069 FAM111BQ6SJ93 734 aa10.93□□□□□ -0.66
COPA-202ENST00000368069 SERPINA12Q8IW75 414 aa10.93□□□□□ -0.66
COPA-202ENST00000368069 DNAJC5GQ8N7S2 189 aa10.93□□□□□ -0.66
COPA-202ENST00000368069 YIPF6Q96EC8 236 aa10.93□□□□□ -0.66
COPA-202ENST00000368069 OR51J1Q9H342 316 aa10.93□□□□□ -0.66
COPA-202ENST00000368069 SYNPO2LQ9H987 977 aa10.93□□□□□ -0.66
COPA-202ENST00000368069 EPHA6Q9UF33 1036 aa10.93□□□□□ -0.66
COPA-202ENST00000368069 NEU3Q9UQ49 428 aa10.93□□□□□ -0.66
COPA-202ENST00000368069 ATAD5Q96QE3 1844 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 S100A6P06703 90 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 FBXO45P0C2W1 286 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 RPS5P46782 204 aaKnown RBP10.92□□□□□ -0.66
COPA-202ENST00000368069 RAB11BQ15907 218 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 ZNF77Q15935 545 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 TMEM52BQ4KMG9 183 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 SAXO2Q658L1 398 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 RAB12Q6IQ22 244 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 DHRS4L2Q6PKH6 230 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 ZER1Q7Z7L7 766 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 LAS2Q8IYD9 372 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 ZNF471Q9BX82 626 aaPredicted RBP10.92□□□□□ -0.66
COPA-202ENST00000368069 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.92□□□□□ -0.662e-15■■■■■ 52.9
COPA-202ENST00000368069 INPP5EQ9NRR6 644 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 MED17Q9NVC6 651 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 TMEFF2Q9UIK5 374 aaPredicted RBP10.92□□□□□ -0.66
COPA-202ENST00000368069 ERVK-19Q9WJR5 959 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 KIAA0100Q14667 2235 aaKnown RBP10.92□□□□□ -0.66
COPA-202ENST00000368069 SYT5O00445 386 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 SOCS6O14544 535 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 PRPH2P23942 346 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 FXYD6P3P58550 94 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 ABHD17CQ6PCB6 329 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 MBOAT2Q6ZWT7 520 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 RASGRP3Q8IV61 690 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 SCGB3A2Q96PL1 93 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 PLCL2Q9UPR0 1127 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 MED16Q9Y2X0 877 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 HEXBP07686 556 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 IRS1P35568 1242 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 DHPSP49366 369 aaPredicted RBP10.92□□□□□ -0.66
COPA-202ENST00000368069 S100A10P60903 97 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 NKX3-2P78367 333 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 ABCA11PQ4W5N1 156 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 ULK3Q6PHR2 472 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 MAMDC2Q7Z304 686 aaPredicted RBP10.92□□□□□ -0.66
COPA-202ENST00000368069 PRICKLE2Q7Z3G6 844 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 MCEMP1Q8IX19 187 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 TMEM255BQ8WV15 326 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 HOXD1Q9GZZ0 328 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 C11orf54Q9H0W9 315 aaPredicted RBP10.92□□□□□ -0.66
COPA-202ENST00000368069 ZNF226Q9NYT6 803 aa10.92□□□□□ -0.66
COPA-202ENST00000368069 TRAV18A0A075B6X5 111 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 HMGN4O00479 90 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 SULT1C4O75897 302 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 PROS1P07225 676 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 GIFP27352 417 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 PDX1P52945 283 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 EIF5AP63241 154 aaKnown RBP10.91□□□□□ -0.66
COPA-202ENST00000368069 GRM7Q14831 915 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 PHF19Q5T6S3 580 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 NXPE2Q96DL1 559 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 HDAC8Q9BY41 377 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 TESQ9UGI8 421 aaKnown RBP10.91□□□□□ -0.66
COPA-202ENST00000368069 H0YGG7 62 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 RAD1O60671 282 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 PRH1P02810 166 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 F3P13726 295 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 TRIM23P36406 574 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 CLRN1P58418 232 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 ARF3P61204 181 aaPredicted RBP10.91□□□□□ -0.66
COPA-202ENST00000368069 OCLNQ16625 522 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 SYT14P1Q58G82 188 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 TANGO2Q6ICL3 276 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 SLC48A1Q6P1K1 146 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 USP53Q70EK8 1073 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 POGLUT1Q8NBL1 392 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 LMF1Q96S06 567 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 NKX2-4Q9H2Z4 354 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 C1GALT1Q9NS00 363 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 ZAR1LA6NP61 321 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 PHYHO14832 338 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 GPX5O75715 221 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 SNAPC5O75971 98 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 ENDOUP21128 410 aaKnown RBP10.91□□□□□ -0.66
COPA-202ENST00000368069 CTGFP29279 349 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 ARRB1P49407 418 aaPredicted RBP10.91□□□□□ -0.66
COPA-202ENST00000368069 FAM189A2Q15884 450 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 C1orf189Q5VU69 101 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 XAF1Q6GPH4 301 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 SLC18B1Q6NT16 456 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 GDF7Q7Z4P5 450 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 PRR22Q8IZ63 422 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 NANOGP1Q8N7R0 232 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 OR13C3Q8NGS6 347 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 SNAPC3Q92966 411 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 TXNDC15Q96J42 360 aa10.91□□□□□ -0.66
COPA-202ENST00000368069 MNTQ99583 582 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms