RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 EFHD2Q96C19 240 aaPredicted RBP11.18□□□□□ -0.62
MRPL55-209ENST00000366735 STARD4Q96DR4 205 aa11.18□□□□□ -0.62
MRPL55-209ENST00000366735 PERPQ96FX8 193 aa11.18□□□□□ -0.62
MRPL55-209ENST00000366735 WFIKKN1Q96NZ8 548 aa11.18□□□□□ -0.62
MRPL55-209ENST00000366735 HBEGFQ99075 208 aa11.18□□□□□ -0.62
MRPL55-209ENST00000366735 PINK1Q9BXM7 581 aa11.18□□□□□ -0.62
MRPL55-209ENST00000366735 CADM1Q9BY67 442 aaKnown RBP11.18□□□□□ -0.62
MRPL55-209ENST00000366735 MMADHCQ9H3L0 296 aaPredicted RBP11.18□□□□□ -0.62
MRPL55-209ENST00000366735 C3orf14Q9HBI5 128 aa11.18□□□□□ -0.62
MRPL55-209ENST00000366735 Q9N2J8 555 aa11.18□□□□□ -0.62
MRPL55-209ENST00000366735 MIEF1Q9NQG6 463 aa11.18□□□□□ -0.62
MRPL55-209ENST00000366735 SLC35C2Q9NQQ7 365 aa11.18□□□□□ -0.62
MRPL55-209ENST00000366735 PAQR5Q9NXK6 330 aaPredicted RBP11.18□□□□□ -0.62
MRPL55-209ENST00000366735 PROCRQ9UNN8 238 aa11.18□□□□□ -0.62
MRPL55-209ENST00000366735 EMC9Q9Y3B6 208 aa11.18□□□□□ -0.62
MRPL55-209ENST00000366735 CHD3Q12873 2000 aaKnown RBP11.18□□□□□ -0.62
MRPL55-209ENST00000366735 A0A087WV62 115 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 BBIP1A8MTZ0 92 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 H3BML4 177 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 H7C1Q1 480 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 ANKRD28O15084 1053 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 SEC14L5O43304 696 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 TMCC2O75069 709 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 SEC22BO75396 215 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 TIA1P31483 386 aaKnown RBP eCLIP11.17□□□□□ -0.62
MRPL55-209ENST00000366735 GAS1P54826 345 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 ZNF763Q0D2J5 394 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 SGCBQ16585 318 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 CYP27C1Q4G0S4 372 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 COQ5Q5HYK3 327 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 IL23RQ5VWK5 629 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 PLXDC2Q6UX71 529 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 NPSR1Q6W5P4 371 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 ALDH16A1Q8IZ83 802 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 FADS6Q8N9I5 356 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 OR2M3Q8NG83 312 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 FBXO27Q8NI29 283 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 UTP4Q969X6 686 aaKnown RBP11.17□□□□□ -0.62
MRPL55-209ENST00000366735 ARSGQ96EG1 525 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 PRRG4Q9BZD6 226 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 OPN3Q9H1Y3 402 aaPredicted RBP11.17□□□□□ -0.62
MRPL55-209ENST00000366735 DSN1Q9H410 356 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 CXorf56Q9H5V9 222 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 RNF122Q9H9V4 155 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 EFCAB1Q9HAE3 211 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 FAM120CQ9NX05 1096 aaKnown RBP11.17□□□□□ -0.62
MRPL55-209ENST00000366735 SIRT5Q9NXA8 310 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 NDE1Q9NXR1 346 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 AP4B1Q9Y6B7 739 aa11.17□□□□□ -0.62
MRPL55-209ENST00000366735 FAM234BA2RU67 622 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 TTC36A6NLP5 189 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 DEFB108AA8MXU0 73 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 ZIC3O60481 467 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 SLC22A3O75751 556 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 LY6G6DO95868 133 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 PLGP00747 810 aaPredicted RBP11.16□□□□□ -0.62
MRPL55-209ENST00000366735 KRT16P08779 473 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 PRPS2P11908 318 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 NR1H2P55055 460 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 B3GALT5-AS1P59052 145 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 RPL38P63173 70 aaKnown RBP11.16□□□□□ -0.62
MRPL55-209ENST00000366735 PON3Q15166 354 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 GLYR1Q49A26 553 aaPredicted RBP11.16□□□□□ -0.62
MRPL55-209ENST00000366735 BEX5Q5H9J7 111 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 HACD2Q6Y1H2 254 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 PLEKHM3Q6ZWE6 761 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 FAM214BQ7L5A3 538 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 BTLAQ7Z6A9 289 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 ARHGAP24Q8N264 748 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 METTL25Q8N6Q8 603 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 GLB1L3Q8NCI6 653 aaPredicted RBP11.16□□□□□ -0.62
MRPL55-209ENST00000366735 CDC26Q8NHZ8 85 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 C16orf78Q8WTQ4 265 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 TMEM171Q8WVE6 324 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 C11orf24Q96F05 449 aaPredicted RBP11.16□□□□□ -0.62
MRPL55-209ENST00000366735 ZC3HAV1LQ96H79 300 aaKnown RBP11.16□□□□□ -0.62
MRPL55-209ENST00000366735 C1orf50Q9BV19 199 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 TBL1XR1Q9BZK7 514 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 GSX2Q9BZM3 304 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 ANKRA2Q9H9E1 313 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 SLC52A3Q9NQ40 469 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 DDX18Q9NVP1 670 aaKnown RBP11.16□□□□□ -0.62
MRPL55-209ENST00000366735 CCDC167Q9P0B6 97 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 NDUFAF1Q9Y375 327 aa11.16□□□□□ -0.62
MRPL55-209ENST00000366735 SMAD7O15105 426 aaKnown RBP11.15□□□□□ -0.62
MRPL55-209ENST00000366735 KCNH1O95259 989 aa11.15□□□□□ -0.62
MRPL55-209ENST00000366735 ANXA4P09525 319 aaPredicted RBP11.15□□□□□ -0.62
MRPL55-209ENST00000366735 G6PDP11413 515 aa11.15□□□□□ -0.62
MRPL55-209ENST00000366735 BCKDHAP12694 445 aa11.15□□□□□ -0.62
MRPL55-209ENST00000366735 ZNF17P17021 662 aa11.15□□□□□ -0.62
MRPL55-209ENST00000366735 DDCP20711 480 aa11.15□□□□□ -0.62
MRPL55-209ENST00000366735 TBXA2RP21731 343 aa11.15□□□□□ -0.62
MRPL55-209ENST00000366735 CCKARP32238 428 aa11.15□□□□□ -0.62
MRPL55-209ENST00000366735 PGM1P36871 562 aa11.15□□□□□ -0.62
MRPL55-209ENST00000366735 KIR2DL2P43627 348 aaPredicted RBP11.15□□□□□ -0.62
MRPL55-209ENST00000366735 NCBP2P52298 156 aaKnown RBP eCLIP11.15□□□□□ -0.62
MRPL55-209ENST00000366735 CTBP2P56545 445 aa11.15□□□□□ -0.62
MRPL55-209ENST00000366735 UFM1P61960 85 aa11.15□□□□□ -0.62
MRPL55-209ENST00000366735 MXRA7P84157 204 aa11.15□□□□□ -0.62
MRPL55-209ENST00000366735 PSG6Q00889 435 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms