RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 PPP1R36Q96LQ0 422 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SLC39A3Q9BRY0 314 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 MEAF6Q9HAF1 191 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 GLRX2Q9NS18 164 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 MCTS1Q9ULC4 181 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 PROCRQ9UNN8 238 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 FLNAP21333 2647 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 C2CD3Q4AC94 2353 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 PRSS51A0A1B0GVH4 220 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 DUXAA6NLW8 204 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ZNF195O14628 629 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CASKO14936 926 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CFLARO15519 480 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 EIF4E2O60573 245 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 TUBBP07437 444 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 PRKCAP17252 672 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 MATN1P21941 496 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 WDR4P57081 412 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ADAM8P78325 824 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 BST1Q10588 318 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 STX3Q13277 289 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CASP8Q14790 479 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 POU4F3Q15319 338 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 DEFB113Q30KQ7 82 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 NDUFAF6Q330K2 333 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 HBMQ6B0K9 141 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 KIRREL3Q8IZU9 778 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 FBXO27Q8NI29 283 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 OSTF1Q92882 214 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CHMP6Q96FZ7 201 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 KLHL15Q96M94 604 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 NUF2Q9BZD4 464 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ZNF350Q9GZX5 532 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 TMEM185BQ9H7F4 350 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 DLL4Q9NR61 685 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 PNPOQ9NVS9 261 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 KLHL28Q9NXS3 571 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 C6orf203Q9P0P8 240 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CLEC4AQ9UMR7 237 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 EMC9Q9Y3B6 208 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 GPC6Q9Y625 555 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ACANP16112 2415 aa12.22□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CENPVL1A0A0U1RR11 272 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 H3BNH8 94 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ZNF264O43296 627 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SNNO75324 88 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 UGT2B17O75795 530 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 AK1P00568 194 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 THBDP07204 575 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ALDOCP09972 364 aaKnown RBP12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CD99P14209 185 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 LBPP18428 481 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 KLK2P20151 261 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 HOXC12P31275 282 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 RNF144AP50876 292 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CARD18P57730 90 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SKP2Q13309 424 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ZNF239Q16600 458 aaKnown RBP12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 PDZK1Q5T2W1 519 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 FBXW10Q5XX13 1052 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SAXO2Q658L1 398 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 STAC2Q6ZMT1 411 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CROCCP2Q86T23 111 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CXorf67Q86X51 503 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 KRTAP1-3Q8IUG1 177 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 OR5W2Q8NH69 310 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 RNF128Q8TEB7 428 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 MRGPRX4Q96LA9 322 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 TEX37Q96LM6 180 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SRXN1Q9BYN0 137 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 PRRG4Q9BZD6 226 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 DPY30Q9C005 99 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SAP130Q9H0E3 1048 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 COQ10BQ9H8M1 238 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ZNF226Q9NYT6 803 aa12.21□□□□□ -0.45
TNFRSF1A-202ENST00000366159 HEATR5AQ86XA9 2040 aa12.21□□□□□ -0.46
TNFRSF1A-202ENST00000366159 RNF103-CHMP3A0A140T963 221 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SERINC4A6NH21 518 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SDHDO14521 159 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 STX11O75558 287 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 C1QCP02747 245 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 UQCRC2P22695 453 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ME2P23368 584 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 AGTR1P30556 359 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SOAT1P35610 550 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SLC18A1P54219 525 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 FUT5Q11128 374 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 KEAP1Q14145 624 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 MAPK14Q16539 360 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 DPY19L1Q2PZI1 675 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SPANXN4Q5MJ08 99 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PDSS1Q5T2R2 415 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ANXA8L1Q5VT79 327 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 OLIG3Q7RTU3 272 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ZNF550Q7Z398 422 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ANKRD46Q86W74 232 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 FAM71CQ8NEG0 241 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TOR1AIP2Q8NFQ8 470 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 OR4A15Q8NGL6 344 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 OIT3Q8WWZ8 545 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms