RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 COL12A1Q99715 3063 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 THADAQ6YHU6 1953 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 FLNCQ14315 2725 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 A0A1W2PNU3 283 aaPredicted RBP4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 SH3PXD2BA1X283 911 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 E9PAM4 449 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 ZNF821O75541 412 aaPredicted RBP4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 B3GALNT1O75752 331 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 SEMA4FO95754 770 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 ASS1P00966 412 aaKnown RBP4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 TGFAP01135 160 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 PTMSP20962 102 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 FHITP49789 147 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 METAP1P53582 386 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 CYCSP99999 105 aaKnown RBP4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 HSPA14Q0VDF9 509 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 ZNF699Q32M78 642 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 RFTN2Q52LD8 501 aaPredicted RBP4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 HES3Q5TGS1 186 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 CCDC73Q6ZRK6 1079 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 C17orf64Q86WR6 236 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 C12orf56Q8IXR9 622 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 ADAD2Q8NCV1 583 aaKnown RBP4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 OR2T6Q8NHC8 308 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 SYAP1Q96A49 352 aaPredicted RBP4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 RAB39BQ96DA2 213 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 NAF1Q96HR8 494 aaKnown RBP4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 RBM4Q9BWF3 364 aaKnown RBP4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 NACA2Q9H009 215 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 SIRPDQ9H106 197 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 NEUROG2Q9H2A3 272 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 SLC26A1Q9H2B4 701 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 BLZF1Q9H2G9 400 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 FBXO44Q9H4M3 255 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 UBE2TQ9NPD8 197 aaPredicted RBP4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 SCRT2Q9NQ03 307 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 NLGN3Q9NZ94 848 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 CITO14578 2027 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 NUP205Q92621 2012 aa4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 HELZP42694 1942 aaKnown RBP4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 TNRC6BQ9UPQ9 1833 aaKnown RBP4.71□□□□□ -1.66
RNU4-39P-201ENST00000362455 UBR5O95071 2799 aaPredicted RBP4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 TEX15Q9BXT5 2789 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 KNTC1P50748 2209 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 KIAA1549LQ6ZVL6 1849 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 A0A0U1RRA0 63 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 GOLGA6L7A0A1B0GV03 622 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 G3V2L1 256 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 J3QKU1 62 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 K7EQD1 137 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 CASC3O15234 703 aaKnown RBP4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 KRT86O43790 486 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 KLRC4O43908 158 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 NME2P1O60361 137 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 MTRF1O75570 445 aaKnown RBP4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 LDOC1O95751 146 aaPredicted RBP4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 HLA-DRAP01903 254 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 FAM200BP0CF97 657 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 GIMD1P0DJR0 217 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 KRT5P13647 590 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 SELEP16581 610 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 SYT1P21579 422 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 PDHA2P29803 388 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 CD70P32970 193 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 INCA1Q0VD86 236 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 CCDC173Q0VFZ6 552 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 KRT81Q14533 505 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 GPAT3Q53EU6 434 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 MPPE1Q53F39 396 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 BSPRYQ5W0U4 402 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 ZCCHC12Q6PEW1 402 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 ISLR2Q6UXK2 745 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 FRRS1Q6ZNA5 592 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 UNC93AQ86WB7 457 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 CCDC65Q8IXS2 484 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 SLC25A45Q8N413 288 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 EID2Q8N6I1 236 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 LINC00301Q8NCQ3 95 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 LIPHQ8WWY8 451 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 FGF11Q92914 225 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 ART5Q96L15 291 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 TAAR6Q96RI8 345 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 ASCL2Q99929 193 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 DUSP16Q9BY84 665 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 CXXC4Q9H2H0 198 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 B3GAT2Q9NPZ5 323 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 BAIAP2L1Q9UHR4 511 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 STOML2Q9UJZ1 356 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 LSM7Q9UK45 103 aaKnown RBP4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 DIMT1Q9UNQ2 313 aaKnown RBP4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 SMC3Q9UQE7 1217 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 WIPI2Q9Y4P8 454 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 GOLGA4Q13439 2230 aaKnown RBP4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 ATP8B3O60423 1300 aa4.7□□□□□ -1.66
RNU4-39P-201ENST00000362455 PTPN13Q12923 2485 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 OBSL1O75147 1896 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 PI4KAP42356 2102 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 MYO16Q9Y6X6 1858 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 VPS37CA5D8V6 355 aaPredicted RBP4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 FAM47DPA6NHR8 397 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms