RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 DHRSXQ8N5I4 330 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 FAM222BQ8WU58 562 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 TRUB1Q8WWH5 349 aaKnown RBP2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 CCT8L2Q96SF2 557 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 ZBTB18Q99592 522 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 GLT8D2Q9H1C3 349 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 GLIPR2Q9H4G4 154 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 IKZF5Q9H5V7 419 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 RAB18Q9NP72 206 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 HPCAL4Q9UM19 191 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 SCML2Q9UQR0 700 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 ASB3Q9Y575 518 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 ALG6Q9Y672 507 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 FRG2CA6NGY1 282 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 G3V4G9 280 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 GPAA1O43292 621 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 TSC22D2O75157 780 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 UGT2B17O75795 530 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 GAS8-AS1O95177 125 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 IL1BP01584 269 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC35E2P0CK97 266 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 PNMTP11086 282 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 RPS2P15880 293 aaKnown RBP2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 ACADSP16219 412 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 CYP2B6P20813 491 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 MMP11P24347 488 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 PTBP1P26599 531 aaKnown RBP eCLIP2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 GRIA1P42261 906 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 DHPSP49366 369 aaPredicted RBP2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 STARP49675 285 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 AIF1P55008 147 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 MRPS11P82912 194 aaKnown RBP2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 C1orf61Q13536 156 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 ELAVL3Q14576 367 aaKnown RBP2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 C15orf32Q32M92 178 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 TIMM50Q3ZCQ8 353 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 TCTEX1D4Q5JR98 221 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 METTL11BQ5VVY1 283 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC22A10Q63ZE4 541 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 PMF1Q6P1K2 205 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 Q6ZPB1 254 aaPredicted RBP2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 MCOLN2Q8IZK6 566 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 TMEM123Q8N131 208 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 LRRC75A-AS1Q8N1F1 130 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR5L2Q8NGL0 311 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 SPATA3Q8NHX4 192 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 CCDC26Q8TAB7 109 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 FOXN4Q96NZ1 517 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 NIPSNAP3BQ9BS92 247 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 TMEM43Q9BTV4 400 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 CRNKL1Q9BZJ0 848 aaKnown RBP2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 CAB39LQ9H9S4 337 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 SPRR3Q9UBC9 169 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 LCMT1Q9UIC8 334 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 RIMS3Q9UJD0 308 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 PTBP2Q9UKA9 531 aaKnown RBP2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 CLEC4AQ9UMR7 237 aa2.85□□□□□ -1.95
RNU6-28P-201ENST00000362378 LOC100131303A0A0U1RQF7 123 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 TRIM64CA6NLI5 447 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 RS1O15537 224 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 ZNF208O43345 1280 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 BCL2L11O43521 198 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 SCGNO76038 276 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 LRATO95237 230 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 IGHG4P01861 327 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 DBTP11182 482 aaKnown RBP2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 CALB2P22676 271 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 NMT1P30419 496 aaKnown RBP2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 IL2RGP31785 369 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 CASP4P49662 377 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 CEBPDP49716 269 aaPredicted RBP2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 RPL32P62910 135 aaKnown RBP2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 CXCL6P80162 114 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 CD47Q08722 323 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 NCBP1Q09161 790 aaKnown RBP2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 LRRC74AQ0VAA2 488 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 ASAH1Q13510 395 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 QRICH1Q2TAL8 776 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC25A52Q3SY17 297 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 PAN3Q58A45 887 aaKnown RBP2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 CGB2Q6NT52 195 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 FAM199XQ6PEV8 388 aaPredicted RBP2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 KCNIP4Q6PIL6 250 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 EFL1Q7Z2Z2 1120 aaKnown RBP2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 GPR137CQ8N3F9 429 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 KIR3DL3Q8N743 410 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 BHLHE23Q8NDY6 225 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR51G2Q8NGK0 314 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR13C2Q8NGS9 318 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 GTSF1Q8WW33 167 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 CELF6Q96J87 481 aaKnown RBP2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR5M11Q96RB7 305 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 MAGT1Q9H0U3 335 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 NXF5Q9H1B4 397 aaKnown RBP2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 RHBGQ9H310 441 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 LRRN3Q9H3W5 708 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 MIEF1Q9NQG6 463 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC17A5Q9NRA2 495 aa2.84□□□□□ -1.95
RNU6-28P-201ENST00000362378 PAK1IP1Q9NWT1 392 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms