RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 HMGN1P05114 100 aa17.73■□□□□ 0.43
CMTM3-201ENST00000361909 NMBP08949 121 aa17.73■□□□□ 0.43
CMTM3-201ENST00000361909 ATP6V1E1P36543 226 aa17.73■□□□□ 0.43
CMTM3-201ENST00000361909 ANXA11P50995 505 aaKnown RBP17.73■□□□□ 0.43
CMTM3-201ENST00000361909 METAP1P53582 386 aa17.73■□□□□ 0.43
CMTM3-201ENST00000361909 SNTB2Q13425 540 aaKnown RBP17.73■□□□□ 0.43
CMTM3-201ENST00000361909 INSL4Q14641 139 aa17.73■□□□□ 0.43
CMTM3-201ENST00000361909 TRAM2Q15035 370 aa17.73■□□□□ 0.43
CMTM3-201ENST00000361909 ELFN2Q5R3F8 820 aa17.73■□□□□ 0.43
CMTM3-201ENST00000361909 ZNF765Q7L2R6 523 aa17.73■□□□□ 0.43
CMTM3-201ENST00000361909 ACBD7Q8N6N7 88 aa17.73■□□□□ 0.43
CMTM3-201ENST00000361909 RAB8BQ92930 207 aa17.73■□□□□ 0.43
CMTM3-201ENST00000361909 SCAMP4Q969E2 229 aa17.73■□□□□ 0.43
CMTM3-201ENST00000361909 BRD7Q9NPI1 651 aa17.73■□□□□ 0.43
CMTM3-201ENST00000361909 A0A0G2JK05 382 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 SLC5A10A0PJK1 596 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 SLC9B1P1A6NJY1 282 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 PI15O43692 258 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 TYRP1P17643 537 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 FPR3P25089 353 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 CTHP32929 405 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 SMAD4Q13485 552 aaKnown RBP17.72■□□□□ 0.43
CMTM3-201ENST00000361909 MLC1Q15049 377 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 IL20RBQ6UXL0 311 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 CXXC5Q7LFL8 322 aaKnown RBP17.72■□□□□ 0.43
CMTM3-201ENST00000361909 PIGXQ8TBF5 258 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 RGMAQ96B86 450 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 DTD2Q96FN9 168 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 C12orf66Q96MD2 445 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 DDOQ99489 341 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 RIOK2Q9BVS4 552 aaKnown RBP17.72■□□□□ 0.43
CMTM3-201ENST00000361909 SLC7A5P2Q9GIP4 190 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 C8orf33Q9H7E9 229 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-201ENST00000361909 NPDC1Q9NQX5 325 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-201ENST00000361909 NANSQ9NR45 359 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 A0A1B0GW55 424 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 AIPO00170 330 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 SYT5O00445 386 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 STX11O75558 287 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 TFP02787 698 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 DUX4L2P0CJ85 424 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 DUX4L3P0CJ86 424 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 DUX4L4P0CJ87 422 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 DUX4L5P0CJ88 424 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 DUX4L6P0CJ89 424 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 DUX4L7P0CJ90 424 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 NPPBP16860 134 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 FZD5Q13467 585 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 PGGHGQ32M88 737 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 CCSMST1Q4G0I0 132 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 PRAMEF8Q5VWM4 474 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 PRAMEF7Q5VXH5 474 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 EID2Q8N6I1 236 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 LILRB1Q8NHL6 650 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-201ENST00000361909 SUN3Q8TAQ9 357 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 SMIM4Q8WVI0 70 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 SLC5A11Q8WWX8 675 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 WFDC6Q9BQY6 131 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 PINK1Q9BXM7 581 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 SIRT3Q9NTG7 399 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-201ENST00000361909 ACSS1Q9NUB1 689 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-201ENST00000361909 DUX4Q9UBX2 424 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 SPATA2Q9UM82 520 aa17.72■□□□□ 0.43
CMTM3-201ENST00000361909 SZT2Q5T011 3432 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 A0A087WUU8 490 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 C2CD4DB7Z1M9 353 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 SAP18O00422 153 aaKnown RBP17.71■□□□□ 0.43
CMTM3-201ENST00000361909 ABCD4O14678 606 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 PGRMC2O15173 223 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 ECDO95905 644 aaPredicted RBP17.71■□□□□ 0.43
CMTM3-201ENST00000361909 ADH1BP00325 375 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 NR2F1P10589 423 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 SELENOPP49908 381 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 CCR6P51684 374 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 PCBP4P57723 403 aaKnown RBP17.71■□□□□ 0.43
CMTM3-201ENST00000361909 AP3S2P59780 193 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 RAB8AP61006 207 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 KIAA1161Q6NSJ0 714 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 NXPE4Q6UWF7 544 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 B3GLCTQ6Y288 498 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 BVESQ8NE79 360 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 TTLQ8NG68 377 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 OR6T1Q8NGN1 323 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 MOSPD2Q8NHP6 518 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 ZNF480Q8WV37 535 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 MARC2Q969Z3 335 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 ELMOD3Q96FG2 381 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 SLC35G5Q96KT7 338 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 MFRPQ9BY79 579 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 FBRSQ9HAH7 460 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 PLEKHA1Q9HB21 404 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 SLAMF7Q9NQ25 335 aa17.71■□□□□ 0.43
CMTM3-201ENST00000361909 COL4A2P08572 1712 aa17.7■□□□□ 0.42
CMTM3-201ENST00000361909 ANTXRLA6NF34 631 aa17.7■□□□□ 0.42
CMTM3-201ENST00000361909 TRABD2BA6NFA1 517 aa17.7■□□□□ 0.42
CMTM3-201ENST00000361909 ZNF749O43361 778 aa17.7■□□□□ 0.42
CMTM3-201ENST00000361909 PLPP2O43688 288 aa17.7■□□□□ 0.42
CMTM3-201ENST00000361909 CD3GP09693 182 aa17.7■□□□□ 0.42
CMTM3-201ENST00000361909 PAICSP22234 425 aaKnown RBP17.7■□□□□ 0.42
CMTM3-201ENST00000361909 SHC1P29353 583 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms