RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 COL13A1Q5TAT6 717 aaPredicted RBP12.92□□□□□ -0.34
CTR9-201ENST00000361367 OR7G1Q8NGA0 311 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 NRSN2Q9GZP1 204 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 IGHV3-20A0A0C4DH32 117 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 SHISA7A6NL88 538 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 IDSB3KWA1 339 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 CSN2P05814 226 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 CDK5R2Q13319 367 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 KEAP1Q14145 624 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 TRMT12Q53H54 448 aaKnown RBP12.92□□□□□ -0.34
CTR9-201ENST00000361367 ZNF419Q96HQ0 510 aaPredicted RBP12.92□□□□□ -0.34
CTR9-201ENST00000361367 SESN1Q9Y6P5 492 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 ZNF878C9JN71 531 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 ZNF182P17025 639 aaPredicted RBP12.92□□□□□ -0.34
CTR9-201ENST00000361367 DMPKQ09013 629 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 TUBA3EQ6PEY2 450 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 LINC00696Q6ZRV3 163 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 PRSS48Q7RTY5 328 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 MMP21Q8N119 569 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 POU2F3Q9UKI9 436 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 ZNF337Q9Y3M9 751 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 IGHV1OR15-9A0A0B4J2B8 117 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 FAM172BPA6NC97 362 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 LILRA5A6NI73 299 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 M0R129 80 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 UTS2O95399 124 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 MYF5P13349 255 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 EEF1A1P68104 462 aaKnown RBP12.91□□□□□ -0.34
CTR9-201ENST00000361367 GAB1Q13480 694 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 PDE7AQ13946 482 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 SF3B4Q15427 424 aaKnown RBP eCLIP12.91□□□□□ -0.345e-6■■□□□ 12.1
CTR9-201ENST00000361367 SEC23BQ15437 767 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 OLFML2AQ68BL7 652 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 MS4A15Q8N5U1 240 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 STT3BQ8TCJ2 826 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 S100A16Q96FQ6 103 aaKnown RBP12.91□□□□□ -0.34
CTR9-201ENST00000361367 LRRC3BQ96PB8 259 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 DCBLD2Q96PD2 775 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 TUBA1CQ9BQE3 449 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 G3V3Y1 287 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 ORC5O43913 435 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 TRHRP34981 398 aaPredicted RBP12.91□□□□□ -0.34
CTR9-201ENST00000361367 TMBIM6P55061 237 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 GLO1Q04760 184 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 CARTPTQ16568 116 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 VWA2Q5GFL6 755 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 FIP1L1Q6UN15 594 aaKnown RBP12.91□□□□□ -0.34
CTR9-201ENST00000361367 UNQ6126/PRO20091Q6UXV3 157 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 ISOC1Q96CN7 298 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 TWSG1Q9GZX9 223 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 TMEM38AQ9H6F2 299 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 A4GALTQ9NPC4 353 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 RLIMQ9NVW2 624 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 POMT2Q9UKY4 750 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 TRIP11Q15643 1979 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 WRBO00258 174 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 FGF17O60258 216 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 ATE1O95260 518 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 CSF2P04141 144 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 TRIM23P36406 574 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 C22orf42Q6IC83 251 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 OLIG3Q7RTU3 272 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 TMEM17Q86X19 198 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 TOMM5Q8N4H5 51 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 TAMM41Q96BW9 452 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 HDHD5Q9BXW7 423 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 IRF2BPLQ9H1B7 796 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 ATP13A2Q9NQ11 1180 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 SLC7A11Q9UPY5 501 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 GREB1LQ9C091 1923 aaPredicted RBP12.91□□□□□ -0.34
CTR9-201ENST00000361367 SEC16AO15027 2179 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 A0A1B0GTL3 188 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 OTOL1A6NHN0 477 aaPredicted RBP12.91□□□□□ -0.34
CTR9-201ENST00000361367 CENPBD1B2RD01 187 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 TACR3P29371 465 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 RPS5P46782 204 aaKnown RBP12.91□□□□□ -0.34
CTR9-201ENST00000361367 C17orf67Q0P5P2 114 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 ANKDD1AQ495B1 522 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 GALNT6Q8NCL4 622 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 LGALS12Q96DT0 336 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 MED28Q9H204 178 aa12.91□□□□□ -0.34
CTR9-201ENST00000361367 SIPA1L1O43166 1804 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 RGPD3A6NKT7 1758 aaPredicted RBP12.9□□□□□ -0.34
CTR9-201ENST00000361367 SYT5O00445 386 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 GM2AP17900 193 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 ZNF829Q3KNS6 432 aaPredicted RBP12.9□□□□□ -0.34
CTR9-201ENST00000361367 TMEM176BQ3YBM2 270 aaPredicted RBP12.9□□□□□ -0.34
CTR9-201ENST00000361367 MISPQ8IVT2 679 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 FTMTQ8N4E7 242 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 OR1J4Q8NGS1 313 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 ZNF597Q96LX8 424 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 KLHL15Q96M94 604 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 ASCC3Q8N3C0 2202 aaKnown RBP12.9□□□□□ -0.34
CTR9-201ENST00000361367 SPTA1P02549 2419 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 ETHE1O95571 254 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 GIPRP48546 466 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 MALLQ13021 153 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 FZD2Q14332 565 aa12.9□□□□□ -0.34
CTR9-201ENST00000361367 C6orf15Q6UXA7 325 aaPredicted RBP12.9□□□□□ -0.34
CTR9-201ENST00000361367 ZSCAN4Q8NAM6 433 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms