RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 TRMT61AQ96FX7 289 aaKnown RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF681Q96N22 645 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 BBS4Q96RK4 519 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 BARHL1Q9BZE3 327 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 TINAGL1Q9GZM7 467 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 CHODLQ9H9P2 273 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 PCDHB16Q9NRJ7 776 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 TVP23BQ9NYZ1 205 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 VSX1Q9NZR4 365 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 HSF4Q9ULV5 492 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 DIMT1Q9UNQ2 313 aaKnown RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 KCNE3Q9Y6H6 103 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 ATG2AQ2TAZ0 1938 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 A0A0G2JNJ9 132 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 A0A1W2PS29 197 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 OR52A4PA6NMU1 304 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 RFXAPO00287 272 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 CTDSP2O14595 271 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 PROM1O43490 865 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 TLX2O43763 284 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 TPST2O60704 377 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 ATP6V1G1O75348 118 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 CNOT4O95628 575 aaKnown RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 AIFM1O95831 613 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 FHP07954 510 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 F3P13726 295 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 SSTR4P31391 388 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 CASP6P55212 293 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 RPS21P63220 83 aaKnown RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 CHRNEQ04844 493 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 DUSP8Q13202 625 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 GPM6BQ13491 265 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 LASP1Q14847 261 aaKnown RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 C18orf63Q68DL7 685 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 FCRL6Q6DN72 434 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF425Q6IV72 752 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 MZT2BQ6NZ67 158 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 POC5Q8NA72 575 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 OR56A1Q8NGH5 318 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 OR52I1Q8NGK6 324 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 OTUB1Q96FW1 271 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 C16orf58Q96GQ5 468 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 NUAK2Q9H093 628 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 SEC14L4Q9UDX3 406 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 Q9UFV3 132 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF229Q9UJW7 825 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 PAIP2BQ9ULR5 123 aaKnown RBP6.79□□□□□ -1.32
CLCN3-202ENST00000360642 RCE1Q9Y256 329 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 TRAPPC4Q9Y296 219 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 CHST2Q9Y4C5 530 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 NUMA1Q14980 2115 aa6.79□□□□□ -1.32
CLCN3-202ENST00000360642 PNMA8CA0A1B0GUJ8 204 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 GUCY1B2O75343 617 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 ACADMP11310 421 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 SPNP16150 400 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 PSMA1P25786 263 aaKnown RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 EIF2B2P49770 351 aaKnown RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 ANXA11P50995 505 aaKnown RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 PRKAG1P54619 331 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 GINS1Q14691 196 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 RPE65Q16518 533 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 PAQR6Q6TCH4 344 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 SZRD1Q7Z422 152 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 TRIM73Q86UV7 250 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 IQCHQ86VS3 1027 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 PHC2Q8IXK0 858 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 MFSD9Q8NBP5 474 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 PSD4Q8NDX1 1056 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 ST8SIA4Q92187 359 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 KLK6Q92876 244 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 TXNDC15Q96J42 360 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF582Q96NG8 517 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 ARHGDIGQ99819 225 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 BCO1Q9HAY6 547 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 SPHK1Q9NYA1 384 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 APOBEC3BQ9UH17 382 aaKnown RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 FBXW2Q9UKT8 454 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 STUB1Q9UNE7 303 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 CAB39Q9Y376 341 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 ATG2BQ96BY7 2078 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 HYKKA2RU49 373 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 PGPEP1LA6NFU8 196 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF670-ZNF695F2Z2N8 137 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 LOC110117498-PIK3R3F6TDL0 507 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 PLRG1O43660 514 aaKnown RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 ERAL1O75616 437 aaKnown RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 AGFG2O95081 481 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 RNASE1P07998 156 aaKnown RBP6.78□□□□□ -1.32
CLCN3-202ENST00000360642 ALPPL2P10696 532 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 GSTM3P21266 225 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 CERS1P27544 350 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 TNFSF8P32971 234 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 BNC1Q01954 994 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 SELENBP1Q13228 472 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 SPANXN2Q5MJ10 180 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 TMEM107Q6UX40 140 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 GDPD3Q7L5L3 318 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 UBE2Q1Q7Z7E8 422 aa6.78□□□□□ -1.32
CLCN3-202ENST00000360642 PIK3R3Q92569 461 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms