RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 SF3A2Q15428 464 aaKnown RBP15.27■□□□□ 0.04
SCAF1-201ENST00000360565 LRRC37A5PQ49AS3 106 aa15.27■□□□□ 0.04
SCAF1-201ENST00000360565 TCTE1Q5JU00 501 aa15.27■□□□□ 0.04
SCAF1-201ENST00000360565 SLC48A1Q6P1K1 146 aa15.27■□□□□ 0.04
SCAF1-201ENST00000360565 FOXRED2Q8IWF2 684 aa15.27■□□□□ 0.04
SCAF1-201ENST00000360565 CELF2-AS1Q8N7Q2 184 aa15.27■□□□□ 0.04
SCAF1-201ENST00000360565 RLN3Q8WXF3 142 aa15.27■□□□□ 0.04
SCAF1-201ENST00000360565 SLC25A18Q9H1K4 315 aa15.27■□□□□ 0.04
SCAF1-201ENST00000360565 SLC6A15Q9H2J7 730 aa15.27■□□□□ 0.04
SCAF1-201ENST00000360565 C8orf33Q9H7E9 229 aaPredicted RBP15.27■□□□□ 0.04
SCAF1-201ENST00000360565 SIDT1Q9NXL6 827 aaKnown RBP15.27■□□□□ 0.04
SCAF1-201ENST00000360565 PCDH10Q9P2E7 1040 aa15.27■□□□□ 0.04
SCAF1-201ENST00000360565 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.27■□□□□ 0.03
SCAF1-201ENST00000360565 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.27■□□□□ 0.03
SCAF1-201ENST00000360565 LRIT2A6NDA9 550 aa15.27■□□□□ 0.03
SCAF1-201ENST00000360565 H3BQ06 376 aaPredicted RBP15.27■□□□□ 0.03
SCAF1-201ENST00000360565 KLK3P07288 261 aaPredicted RBP15.27■□□□□ 0.03
SCAF1-201ENST00000360565 DRD1P21728 446 aa15.27■□□□□ 0.03
SCAF1-201ENST00000360565 GABRA5P31644 462 aa15.27■□□□□ 0.03
SCAF1-201ENST00000360565 NR0B1P51843 470 aaKnown RBP15.27■□□□□ 0.03
SCAF1-201ENST00000360565 KIAA0040Q15053 153 aa15.27■□□□□ 0.03
SCAF1-201ENST00000360565 TATDN3Q17R31 274 aa15.27■□□□□ 0.03
SCAF1-201ENST00000360565 ULK3Q6PHR2 472 aa15.27■□□□□ 0.03
SCAF1-201ENST00000360565 KCTD9Q7L273 389 aa15.27■□□□□ 0.03
SCAF1-201ENST00000360565 DEDD2Q8WXF8 326 aa15.27■□□□□ 0.03
SCAF1-201ENST00000360565 FBXL3Q9UKT7 428 aa15.27■□□□□ 0.03
SCAF1-201ENST00000360565 DIMT1Q9UNQ2 313 aaKnown RBP15.27■□□□□ 0.03
SCAF1-201ENST00000360565 DOCK3Q8IZD9 2030 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 KIR2DS5A0A0G2JLQ3 304 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 A0A0G2JNG1 304 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 TVP23AA6NH52 213 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 C17orf105B2RV13 164 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 PRAMEF26H0Y7S4 382 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 KIR2DS3K7RE56 304 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 RAD1O60671 282 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 MYOGP15173 224 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 S100GP29377 79 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 FXYD6P3P58550 94 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 PRPS1P60891 318 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 TNFRSF17Q02223 184 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 SERTAD2Q14140 314 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 KIR2DS5Q14953 304 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 SLC22A10Q63ZE4 541 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 CCSAPQ6IQ19 270 aaPredicted RBP15.26■□□□□ 0.03
SCAF1-201ENST00000360565 OR5AK2Q8NH90 309 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 GABARAPL1Q9H0R8 117 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 SLC6A17Q9H1V8 727 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 PTGES2Q9H7Z7 377 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 COPZ2Q9P299 210 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 EPHA6Q9UF33 1036 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 ARID1AO14497 2285 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 A0A1W2PPL8 197 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 CREBL2O60519 120 aaPredicted RBP15.26■□□□□ 0.03
SCAF1-201ENST00000360565 HOXA9P31269 272 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 HNRNPKP61978 463 aaKnown RBP eCLIP15.26■□□□□ 0.037e-9■■■■■ 31.8
SCAF1-201ENST00000360565 FGFBP1Q14512 234 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 USP51Q70EK9 711 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 MAMDC2Q7Z304 686 aaPredicted RBP15.26■□□□□ 0.03
SCAF1-201ENST00000360565 OR52I1Q8NGK6 324 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 THAP6Q8TBB0 222 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 C19orf43Q9BQ61 176 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 GTPBP2Q9BX10 602 aaKnown RBP15.26■□□□□ 0.03
SCAF1-201ENST00000360565 SLC23A2Q9UGH3 650 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 ZNF831Q5JPB2 1677 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 SYT5O00445 386 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 CTSLP07711 333 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 HOXD12P35452 270 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 RPS19P39019 145 aaKnown RBP15.26■□□□□ 0.03
SCAF1-201ENST00000360565 SLC19A1P41440 591 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 HNRNPFP52597 415 aaKnown RBP15.26■□□□□ 0.03
SCAF1-201ENST00000360565 RIDAP52758 137 aaKnown RBP15.26■□□□□ 0.03
SCAF1-201ENST00000360565 GBX1Q14549 363 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 TCTN3Q6NUS6 607 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 CADM3Q8N126 398 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 FAM3CQ92520 227 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 ADOQ96SZ5 270 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 POTEKPQ9BYX7 375 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 WRBO00258 174 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 SOCS6O14544 535 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 DUX1O43812 170 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 EIF2DP41214 584 aaKnown RBP15.26■□□□□ 0.03
SCAF1-201ENST00000360565 PDX1P52945 283 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 ZER1Q7Z7L7 766 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 CALHM3Q86XJ0 350 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 ADAMTS18Q8TE60 1221 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 ALG14Q96F25 216 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 METTL8Q9H825 291 aaKnown RBP15.26■□□□□ 0.03
SCAF1-201ENST00000360565 FGF22Q9HCT0 170 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 CHMP1AQ9HD42 196 aaPredicted RBP15.26■□□□□ 0.03
SCAF1-201ENST00000360565 TMEFF2Q9UIK5 374 aaPredicted RBP15.26■□□□□ 0.03
SCAF1-201ENST00000360565 POU2F3Q9UKI9 436 aa15.26■□□□□ 0.03
SCAF1-201ENST00000360565 QSER1Q2KHR3 1735 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 HMX3A6NHT5 357 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 HMGN4O00479 90 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 NAXEQ8NCW5 288 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 TOE1Q96GM8 510 aaKnown RBP15.25■□□□□ 0.03
SCAF1-201ENST00000360565 HOXD1Q9GZZ0 328 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 SYNPO2LQ9H987 977 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 KLHL9Q9P2J3 617 aa15.25■□□□□ 0.03
SCAF1-201ENST00000360565 ASB4Q9Y574 426 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms