RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 FAPQ12884 760 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 SLC29A2Q14542 456 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 ASPHD2Q6ICH7 369 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 SHQ1Q6PI26 577 aaKnown RBP5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 CYP20A1Q6UW02 462 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 APOOLQ6UXV4 268 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 TUSC5Q8IXB3 177 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 UBASH3BQ8TF42 649 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 ZFP90Q8TF47 636 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 ST8SIA1Q92185 356 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 STACQ99469 402 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 SF3B5Q9BWJ5 86 aaKnown RBP5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 FBXL3Q9UKT7 428 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 RTCAO00442 366 aaKnown RBP5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 GPR171O14626 319 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 WNT11O96014 354 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 PLATP00750 562 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 CALRP27797 417 aaKnown RBP5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 SERPINF1P36955 418 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 KCNJ5P48544 419 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 TAS2R39P59534 338 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 ACTG1P63261 375 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 MGAT5Q09328 741 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 ERCC6LQ2NKX8 1250 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 TRMT12Q53H54 448 aaKnown RBP5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 IL17RELQ6ZVW7 336 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 FAM9CQ8IZT9 166 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 STAG3L4Q8TBR4 150 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 OSTF1Q92882 214 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 LAT2Q9GZY6 243 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 KLHL21Q9UJP4 597 aa5.17□□□□□ -1.58
CDC42SE2-201ENST00000360515 ZNF195O14628 629 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 DNALI1O14645 258 aaPredicted RBP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 EIF3HO15372 352 aaKnown RBP eCLIP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 ANGPTL1O95841 491 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 DAOP14920 347 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 APEX1P27695 318 aaKnown RBP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 IL12BP29460 328 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 SRP14P37108 136 aaKnown RBP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 ASMTP46597 345 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 RAE1P78406 368 aaKnown RBP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 C18orf21Q32NC0 220 aaPredicted RBP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 SWT1Q5T5J6 900 aaKnown RBP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 RAET1LQ5VY80 246 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 TTC27Q6P3X3 843 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 GALNT5Q7Z7M9 940 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 PLD6Q8N2A8 252 aaKnown RBP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 ITFG2Q969R8 447 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 GPR78Q96P69 363 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 FAIM2Q9BWQ8 316 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 EXOSC3Q9NQT5 275 aaKnown RBP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 PLEK2Q9NYT0 353 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 A0A0G2JN53 185 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 FAM95CA0A1B0GW59 222 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 OR7A17O14581 309 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 CXCL13O43927 109 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 UTS2O95399 124 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 TGFB1P01137 390 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 GDF5P43026 501 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 BASP1P80723 227 aaKnown RBP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 SLC25A3Q00325 362 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 SRSF2Q01130 221 aaKnown RBP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 PAX2Q02962 417 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 TRAF3Q13114 568 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 DECR1Q16698 335 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 C11orf91Q3C1V1 193 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 ANKRD34AQ69YU3 496 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 CMIPQ8IY22 773 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 CLDND2Q8NHS1 167 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 PIGXQ8TBF5 258 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 GPR119Q8TDV5 335 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 ADAMTS15Q8TE58 950 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 C1orf54Q8WWF1 131 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 EFHD2Q96C19 240 aaPredicted RBP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 NMUR2Q9GZQ4 415 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 OR51B5Q9H339 312 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 NMRAL1Q9HBL8 299 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 TGP01266 2768 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 FREM1Q5H8C1 2179 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 IGHV1-18A0A0C4DH31 117 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 FAM159BA6NKW6 160 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 H3BSA7 217 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 NGFP01138 241 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 IGKV1D-16P01601 117 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 EPB42P16452 691 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 PRKCAP17252 672 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 GUCY2DQ02846 1103 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 SPOCK1Q08629 439 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 CCDC25Q86WR0 208 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 PRR22Q8IZ63 422 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 ZNF614Q8N883 585 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 ZNF483Q8TF39 744 aaPredicted RBP5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 SLC38A2Q96QD8 506 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 ADOQ96SZ5 270 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 MED11Q9P086 117 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 PRSS50Q9UI38 385 aa5.16□□□□□ -1.58
CDC42SE2-201ENST00000360515 ALMS1Q8TCU4 4167 aa5.15□□□□□ -1.58
CDC42SE2-201ENST00000360515 LOC102725191A0A1B0GVB3 256 aa5.15□□□□□ -1.58
CDC42SE2-201ENST00000360515 SYCE1LA8MT33 242 aa5.15□□□□□ -1.58
CDC42SE2-201ENST00000360515 H3BQF6 201 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms