RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 CXCR4P61073 352 aa17.28■□□□□ 0.36
SHANK1-202ENST00000359082 MGAT3Q09327 533 aa17.28■□□□□ 0.36
SHANK1-202ENST00000359082 C9orf135Q5VTT2 229 aa17.28■□□□□ 0.36
SHANK1-202ENST00000359082 COL1A1P02452 1464 aaPredicted RBP17.27■□□□□ 0.36
SHANK1-202ENST00000359082 ABHD12BQ7Z5M8 362 aaPredicted RBP17.27■□□□□ 0.36
SHANK1-202ENST00000359082 ITPKCQ96DU7 683 aa17.27■□□□□ 0.36
SHANK1-202ENST00000359082 TMEM181Q9P2C4 612 aa17.27■□□□□ 0.36
SHANK1-202ENST00000359082 SLC6A5Q9Y345 797 aa17.27■□□□□ 0.36
SHANK1-202ENST00000359082 RPS17P08708 135 aaKnown RBP17.27■□□□□ 0.36
SHANK1-202ENST00000359082 ZNF223Q9UK11 482 aaPredicted RBP17.27■□□□□ 0.36
SHANK1-202ENST00000359082 NCR1O76036 304 aa17.27■□□□□ 0.36
SHANK1-202ENST00000359082 EMP2P54851 167 aa17.27■□□□□ 0.36
SHANK1-202ENST00000359082 VRK2Q86Y07 508 aa17.27■□□□□ 0.36
SHANK1-202ENST00000359082 OR5D14Q8NGL3 314 aa17.27■□□□□ 0.36
SHANK1-202ENST00000359082 TCTEX1D2Q8WW35 142 aa17.27■□□□□ 0.36
SHANK1-202ENST00000359082 MSI2Q96DH6 328 aaKnown RBP17.27■□□□□ 0.36
SHANK1-202ENST00000359082 GSTO2Q9H4Y5 243 aa17.27■□□□□ 0.36
SHANK1-202ENST00000359082 INIPQ9NRY2 104 aa17.27■□□□□ 0.36
SHANK1-202ENST00000359082 OR6C2Q9NZP2 312 aa17.27■□□□□ 0.36
SHANK1-202ENST00000359082 ARAFP10398 606 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 ACSM3Q53FZ2 586 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 EXOSC6Q5RKV6 272 aaKnown RBP17.27■□□□□ 0.35
SHANK1-202ENST00000359082 CLEC1AQ8NC01 280 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 HHIPL1Q96JK4 782 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 SLC30A3Q99726 388 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 NUDT22Q9BRQ3 303 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 OBP2BQ9NPH6 170 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 CEBPZOSA8MTT3 80 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 ADAMTS4O75173 837 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 STK17BO94768 372 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 BMP2P12643 396 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 LTC4SQ16873 150 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 OR5M10Q6IEU7 315 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 OR52W1Q6IF63 320 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 SBSNQ6UWP8 590 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 TMEM184AQ6ZMB5 413 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF767PQ75MW2 155 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 DNAJC22Q8N4W6 341 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 TMEM185AQ8NFB2 350 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 ENKD1Q9H0I2 346 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 ACKR4Q9NPB9 350 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 GPATCH2Q9NW75 528 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 SLC6A14Q9UN76 642 aa17.27■□□□□ 0.35
SHANK1-202ENST00000359082 SLC9B1P1A6NJY1 282 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 SLC34A2O95436 690 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 IDUAP35475 653 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 ERV3-1Q14264 604 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 RNF128Q8TEB7 428 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 TAAR8Q969N4 342 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 SAP130Q9H0E3 1048 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 INTS6Q9UL03 887 aaKnown RBP17.26■□□□□ 0.35
SHANK1-202ENST00000359082 PCDHGA1Q9Y5H4 931 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 SPOCK1Q08629 439 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 PROX2Q3B8N5 592 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 SFRP5Q5T4F7 317 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 SUMF2Q8NBJ7 301 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 OR7G3Q8NG95 312 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 SLC7A13Q8TCU3 470 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 PIGCQ92535 297 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 NECTIN4Q96NY8 510 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 PRSS21Q9Y6M0 314 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 C10orf71Q711Q0 1435 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 ANKRD34BA5PLL1 514 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 CBX7O95931 251 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 CDK1P06493 297 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 MS4A2Q01362 244 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 SLC22A6Q4U2R8 563 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 ENTPD8Q5MY95 495 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 PIWIL3Q7Z3Z3 882 aaKnown RBP17.26■□□□□ 0.35
SHANK1-202ENST00000359082 CDC14CA4D256 554 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 RFPL3O75679 317 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 IRF4Q15306 451 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 CLLU1OSQ5K130 101 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 IL26Q9NPH9 171 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 PLCXD1Q9NUJ7 323 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 FAM53CQ9NYF3 392 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 OR14J1Q9UGF5 321 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 MEIS3P2A8K0S8 358 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 HLA-DMAP28067 261 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 PLAG1Q6DJT9 500 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 TECPR1Q7Z6L1 1165 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 ABHD11Q8NFV4 315 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 ASB4Q9Y574 426 aa17.26■□□□□ 0.35
SHANK1-202ENST00000359082 LOC285095A0A1B0GVY8 99 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 CPZQ66K79 652 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 NIPAL3Q6P499 406 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 CD300AQ9UGN4 299 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.25■□□□□ 0.35
SHANK1-202ENST00000359082 ZCWPW2A0A1B0GU75 182 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.25■□□□□ 0.35
SHANK1-202ENST00000359082 PRAMEF26H0Y7S4 382 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 ARHGAP19Q14CB8 494 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 ARL6IP1Q15041 203 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 SF3A2Q15428 464 aaKnown RBP17.25■□□□□ 0.35
SHANK1-202ENST00000359082 CCNJQ5T5M9 372 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 ACOT4Q8N9L9 421 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 PPP1R35Q8TAP8 253 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 HCAR1Q9BXC0 346 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 FUOMA2VDF0 154 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 UGDHO60701 494 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms