RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 U3KQA8 63 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 DSPPQ9NZW4 1301 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 CFAP47Q6ZTR5 3102 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 HEATR5AQ86XA9 2040 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 TNRC6BQ9UPQ9 1833 aaKnown RBP11.72□□□□□ -0.53
GGPS1-202ENST00000358966 LOC400499M0QZD8 3231 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 A0A0G2JPF8 293 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 HNRNPCL2B2RXH8 293 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 HNRNPCL3B7ZW38 293 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 M0R3G1 203 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 WBP4O75554 376 aaKnown RBP11.72□□□□□ -0.53
GGPS1-202ENST00000358966 NSA2O95478 260 aaKnown RBP11.72□□□□□ -0.53
GGPS1-202ENST00000358966 YES1P07947 543 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 HNRNPCL4P0DMR1 293 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 GNSP15586 552 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF250P15622 560 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 S1PR1P21453 382 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 DDOSTP39656 456 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 HSD11B2P80365 405 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 MVKQ03426 396 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 CTF1Q16619 201 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 RFX4Q33E94 735 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 NXNL2Q5VZ03 156 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 HEPHL1Q6MZM0 1159 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF836Q6ZNA1 936 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 EID2Q8N6I1 236 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 IQCF1Q8N6M8 205 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 CTHRC1Q96CG8 243 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 TRAF4Q9BUZ4 470 aaPredicted RBP11.72□□□□□ -0.53
GGPS1-202ENST00000358966 DGCR6LQ9BY27 220 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 BRD7Q9NPI1 651 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 RNF6Q9Y252 685 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 A0A1W2PQM1 296 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF749O43361 778 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 PLOD3O60568 738 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 IGKV1D-16P01601 117 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 HOXB6P17509 224 aaKnown RBP11.71□□□□□ -0.53
GGPS1-202ENST00000358966 PSG6Q00889 435 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 SIGLEC14Q08ET2 396 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 EPS8Q12929 822 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 DCST1Q5T197 706 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 NOXA1Q86UR1 476 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 LAPTM4BQ86VI4 370 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 OR8K3Q8NH51 312 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 NDNFQ8TB73 568 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 ATOH1Q92858 354 aaPredicted RBP11.71□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF285Q96NJ3 590 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 FNDC11Q9BVV2 318 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 SEMA4GQ9NTN9 838 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 NPAP1Q9NZP6 1156 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 NTMQ9P121 344 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 SLC9A8Q9Y2E8 581 aa11.71□□□□□ -0.53
GGPS1-202ENST00000358966 CNTRLQ7Z7A1 2325 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 SYNDIG1LA6NDD5 238 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 SSX4O60224 188 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 TIAF1O95411 115 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 THY1P04216 161 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 CHMP24386 653 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 ANXA11P50995 505 aaKnown RBP11.71□□□□□ -0.54
GGPS1-202ENST00000358966 LSM3P62310 102 aaKnown RBP11.71□□□□□ -0.54
GGPS1-202ENST00000358966 PLAURQ03405 335 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 MAD2L1BPQ15013 274 aaPredicted RBP11.71□□□□□ -0.54
GGPS1-202ENST00000358966 NDUFA9Q16795 377 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 DGUOKQ16854 277 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 TBRG1Q3YBR2 411 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 GARNL3Q5VVW2 1013 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 BCDIN3DQ7Z5W3 292 aaKnown RBP11.71□□□□□ -0.54
GGPS1-202ENST00000358966 PLXDC1Q8IUK5 500 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 SAP25Q8TEE9 199 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 GTPBP2Q9BX10 602 aaKnown RBP11.71□□□□□ -0.54
GGPS1-202ENST00000358966 PRMT8Q9NR22 394 aaPredicted RBP11.71□□□□□ -0.54
GGPS1-202ENST00000358966 PNO1Q9NRX1 252 aaKnown RBP11.71□□□□□ -0.54
GGPS1-202ENST00000358966 CNIH4Q9P003 139 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 ERVK-18Q9QC07 812 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 IL20RAQ9UHF4 553 aa11.71□□□□□ -0.54
GGPS1-202ENST00000358966 ZNF443Q9Y2A4 671 aaPredicted RBP11.71□□□□□ -0.54
GGPS1-202ENST00000358966 I3L521 148 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 DPM1O60762 260 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 SLC35E2P0CK97 266 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 GTF2E2P29084 291 aaKnown RBP11.7□□□□□ -0.54
GGPS1-202ENST00000358966 MAP2K4P45985 399 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 EMDP50402 254 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 HMGA2P52926 109 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 RGS8P57771 180 aaPredicted RBP11.7□□□□□ -0.54
GGPS1-202ENST00000358966 TAS2R41P59536 307 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 FAM53BQ14153 422 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 PTGES3Q15185 160 aaKnown RBP11.7□□□□□ -0.54
GGPS1-202ENST00000358966 NDUFAF6Q330K2 333 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 FAM69BQ5VUD6 431 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 BROXQ5VW32 411 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 NPSR1Q6W5P4 371 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 NKAIN4Q8IVV8 208 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 UBQLNLQ8IYU4 475 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 PTCHD1Q96NR3 888 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 GABARAPL3Q9BY60 117 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 UCK2Q9BZX2 261 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 DSN1Q9H410 356 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 FGF21Q9NSA1 209 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 EPHA6Q9UF33 1036 aa11.7□□□□□ -0.54
GGPS1-202ENST00000358966 CACNG2Q9Y698 323 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms