RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 F2RL3Q96RI0 385 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 NOX3Q9HBY0 568 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 EXOSC1Q9Y3B2 195 aaKnown RBP9.21□□□□□ -0.94
CHD3-202ENST00000358181 CICQ96RK0 1608 aaPredicted RBP9.21□□□□□ -0.94
CHD3-202ENST00000358181 CLDN1O95832 211 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 ZNF630Q2M218 657 aaPredicted RBP9.21□□□□□ -0.94
CHD3-202ENST00000358181 HACD4Q5VWC8 232 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 NXPE4Q6UWF7 544 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 SLC38A5Q8WUX1 472 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 NXPE3Q969Y0 559 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 OR6C1Q96RD1 312 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 HNRNPABQ99729 332 aaKnown RBP9.21□□□□□ -0.94
CHD3-202ENST00000358181 SLC25A18Q9H1K4 315 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 C14orf119Q9NWQ9 140 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 PCDHGA9Q9Y5G4 932 aaKnown RBP9.21□□□□□ -0.94
CHD3-202ENST00000358181 TRAV18A0A075B6X5 111 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 SNRNP70P08621 437 aaKnown RBP9.2□□□□□ -0.94
CHD3-202ENST00000358181 UNC50Q53HI1 259 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 OR4C11Q6IEV9 310 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 NCCRP1Q6ZVX7 275 aaPredicted RBP9.2□□□□□ -0.94
CHD3-202ENST00000358181 GDPD3Q7L5L3 318 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 CD163Q86VB7 1156 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 CHCHD4Q8N4Q1 142 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 C3orf58Q8NDZ4 430 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 ABHD11Q8NFV4 315 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 PKP2Q99959 881 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 LINC00597Q9H2U6 94 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 GPR52Q9Y2T5 361 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 C2CD4BA6NLJ0 364 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 TMEM233B4DJY2 109 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 DLGAP1O14490 977 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 HS3ST1O14792 307 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 IRAK2O43187 625 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 KDELR3O43731 214 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 NXPH2O95156 264 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 FIGLAQ6QHK4 219 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 NPAS3Q8IXF0 933 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 GTPBP8Q8N3Z3 284 aaPredicted RBP9.2□□□□□ -0.94
CHD3-202ENST00000358181 OR2M3Q8NG83 312 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 OR1J4Q8NGS1 313 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 FCGR1BQ92637 280 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 MED18Q9BUE0 208 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 LANCL2Q9NS86 450 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 DTLQ9NZJ0 730 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 BAZ2AQ9UIF9 1905 aaKnown RBP9.2□□□□□ -0.94
CHD3-202ENST00000358181 FANCGO15287 622 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 CBR1P16152 277 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 PORP16435 677 aaPredicted RBP9.2□□□□□ -0.94
CHD3-202ENST00000358181 RAB11AP62491 216 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 GAB1Q13480 694 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 UBE2NLQ5JXB2 153 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 SYT13Q7L8C5 426 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 KCTD20Q7Z5Y7 419 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 TP53INP2Q8IXH6 220 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 FAM58AQ8N1B3 248 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 MINDY1Q8N5J2 469 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 ISOC1Q96CN7 298 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 PECRQ9BY49 303 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 GPR62Q9BZJ7 368 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 BIN3Q9NQY0 253 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 PIGVQ9NUD9 493 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 MYH15Q9Y2K3 1946 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 UBR1Q8IWV7 1749 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 C17orf112F2Z3M2 114 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 GPIP06744 558 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 PEX2P28328 305 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 PYCR1P32322 319 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 SLC11A1P49279 550 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 VASPP50552 380 aaPredicted RBP9.2□□□□□ -0.94
CHD3-202ENST00000358181 JAM2P57087 298 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 BEX5Q5H9J7 111 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 ZNF813Q6ZN06 617 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 SLC35F2Q8IXU6 374 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 MKXQ8IYA7 352 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 RNF128Q8TEB7 428 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 RNF170Q96K19 258 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 AGPAT4Q9NRZ5 378 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 SIT1Q9Y3P8 196 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 MYH2Q9UKX2 1941 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 LRP5LA4QPB2 252 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 ZNF785A8K8V0 405 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 KDM4EB2RXH2 506 aaPredicted RBP9.2□□□□□ -0.94
CHD3-202ENST00000358181 J3KRW8 73 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 PCDH17O14917 1159 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 DAP3P51398 398 aaKnown RBP9.2□□□□□ -0.94
CHD3-202ENST00000358181 CNPY1Q3B7I2 92 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 CTSL3PQ5NE16 218 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 CES4AQ5XG92 561 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 PLBD1Q6P4A8 553 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 SLC16A14Q7RTX9 510 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 M1APQ8TC57 530 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 TEPSINQ96N21 525 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 ALOXE3Q9BYJ1 711 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 KCNIP2Q9NS61 270 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 DMAC2Q9NW81 257 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 ATG4BQ9Y4P1 393 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 A0A0D9SEW6 157 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 ZNF732B4DXR9 585 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 FOXD2O60548 495 aaPredicted RBP9.2□□□□□ -0.94
CHD3-202ENST00000358181 CST6Q15828 149 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms