RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 GPAT4Q86UL3 456 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.44□□□□□ -1.06
UPF2-202ENST00000357604 TMEM151AQ8N4L1 468 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 OR2V1Q8NHB1 315 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 FBXO27Q8NI29 283 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 MIPOL1Q8TD10 442 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 GTF2H4Q92759 462 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 NXF5Q9H1B4 397 aaKnown RBP8.44□□□□□ -1.06
UPF2-202ENST00000357604 MAGED1Q9Y5V3 778 aaPredicted RBP8.44□□□□□ -1.06
UPF2-202ENST00000357604 ZNF195O14628 629 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 KIAA0513O60268 411 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 MT-ATP6P00846 226 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 SFTPDP35247 375 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 GALK2Q01415 458 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 ZNF613Q6PF04 617 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 ZNF836Q6ZNA1 936 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 LUZP2Q86TE4 346 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 LAPTM4BQ86VI4 370 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 SMYD1Q8NB12 490 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 FANK1Q8TC84 345 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 VOPP1Q96AW1 172 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 NOSIPQ9Y314 301 aaKnown RBP8.44□□□□□ -1.06
UPF2-202ENST00000357604 MYO18AQ92614 2054 aaKnown RBP8.44□□□□□ -1.06
UPF2-202ENST00000357604 GXYLT2A0PJZ3 443 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 G3V2T6 193 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 TM4SF5O14894 197 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 MRPL33O75394 65 aaKnown RBP8.44□□□□□ -1.06
UPF2-202ENST00000357604 ADH6P28332 368 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 RNF220Q5VTB9 566 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 SPINK14Q6IE38 97 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 RND1Q92730 232 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 KCNMB2Q9Y691 235 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 TPST1O60507 370 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 UGT2B11O75310 529 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 AGFG2O95081 481 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 UMODP07911 640 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 IFI30P13284 250 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 EDN3P14138 238 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 DNAJA1P31689 397 aaKnown RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 GPR85P60893 370 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ZNF385BQ569K4 471 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 TIGD3Q6B0B8 471 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ALKBH2Q6NS38 261 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 OR5K1Q8NHB7 308 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 RBM4BQ9BQ04 359 aaKnown RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 RBM4Q9BWF3 364 aaKnown RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 CLN6Q9NWW5 311 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.43□□□□□ -1.06
UPF2-202ENST00000357604 CORINQ9Y5Q5 1042 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 PLXND1Q9Y4D7 1925 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ANKRD33BA6NCL7 494 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 A8MVM7 634 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 KPNA4O00629 521 aaPredicted RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 RAB36O95755 333 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 TOP3AQ13472 1001 aaPredicted RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 OR7A5Q15622 319 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 RPS26P11Q5JNZ5 115 aaPredicted RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 MRPL2Q5T653 305 aaKnown RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 GALNT5Q7Z7M9 940 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 RNF113BQ8IZP6 322 aaKnown RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 RNF148Q8N7C7 305 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 CYGBQ8WWM9 190 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 OSTF1Q92882 214 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ARL5BQ96KC2 179 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 PRRC1Q96M27 445 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 USB1Q9BQ65 265 aaKnown RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 MED19A0JLT2 244 aaPredicted RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 ATXN7O15265 892 aaPredicted RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 BCL10O95999 233 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 GUSBP08236 651 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 CD96P40200 585 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 DNASE1L1P49184 302 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 TMEM176BQ3YBM2 270 aaPredicted RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 CCNJQ5T5M9 372 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 RPTNQ6XPR3 784 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 YRDCQ86U90 279 aaKnown RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 SULF2Q8IWU5 870 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ZZZ3Q8IYH5 903 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ANKK1Q8NFD2 765 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 PRR7Q8TB68 274 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 GATA6Q92908 595 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 NRBF2Q96F24 287 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ZNF845Q96IR2 970 aaPredicted RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 ADAD1Q96M93 576 aaKnown RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 CNTNAP3BQ96NU0 1288 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 SDF2Q99470 211 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 POLDIP3Q9BY77 421 aaKnown RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 CNTNAP3Q9BZ76 1288 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 TTTY12Q9BZ98 90 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ENKD1Q9H0I2 346 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ANKRD19PQ9H560 264 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 RERGLQ9H628 205 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 PDP1Q9P0J1 537 aaPredicted RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 HDGFL3Q9Y3E1 203 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 IGKV3D-11A0A0A0MRZ8 115 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 FMO6PO60774 539 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 CBX7O95931 251 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 MT-ND5P03915 603 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 OPN1SWP03999 348 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 HSD17B1P14061 328 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms