RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 FADS6Q8N9I5 356 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 TMEM178AQ8NBL3 297 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 OR6T1Q8NGN1 323 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 B4GALNT2Q8NHY0 566 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 RASSF5Q8WWW0 418 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 PROX1Q92786 737 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 PYURFQ96I23 114 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 ZNF597Q96LX8 424 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 RNF145Q96MT1 663 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 SEPHS2Q99611 448 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 LAT2Q9GZY6 243 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 B3GNT3Q9Y2A9 372 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 IGLV3-32A0A0A0MS00 114 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 TCRBV3S1A0A5B6 114 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 AQP12BA6NM10 295 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 SYT5O00445 386 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 DPM1O60762 260 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 STAMBPO95630 424 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 SEMG1P04279 462 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 ACAA2P42765 397 aaKnown RBP23.11■■□□□ 1.29
SSBP3-202ENST00000357475 TOMM34Q15785 309 aaPredicted RBP23.11■■□□□ 1.29
SSBP3-202ENST00000357475 FKBP9P1Q75LS8 142 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 TSEN54Q7Z6J9 526 aaKnown RBP23.11■■□□□ 1.29
SSBP3-202ENST00000357475 TSPYL5Q86VY4 417 aaPredicted RBP23.11■■□□□ 1.29
SSBP3-202ENST00000357475 PLCZ1Q86YW0 608 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 AQP12AQ8IXF9 295 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 ADGRG5Q8IZF4 528 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 TRIM15Q9C019 465 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 SDHAF3Q9NRP4 125 aa23.11■■□□□ 1.29
SSBP3-202ENST00000357475 ATRXP46100 2492 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 CDC40O60508 579 aaKnown RBP eCLIP23.1■■□□□ 1.29
SSBP3-202ENST00000357475 SEMA7AO75326 666 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 C8BP07358 591 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 IFI44LQ53G44 452 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 MTX3Q5HYI7 312 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 RNFT1Q5M7Z0 435 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 OR1J4Q8NGS1 313 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 CANT1Q8WVQ1 401 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 LZICQ8WZA0 190 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 NPAS1Q99742 590 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 EXOSC3Q9NQT5 275 aaKnown RBP23.1■■□□□ 1.29
SSBP3-202ENST00000357475 SLC13A4Q9UKG4 626 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 PCDHGB6Q9Y5F9 930 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 EPG5Q9HCE0 2579 aa23.1■■□□□ 1.29
SSBP3-202ENST00000357475 TLN1Q9Y490 2541 aaKnown RBP23.09■■□□□ 1.29
SSBP3-202ENST00000357475 KLRC4-KLRK1H3BQV0 150 aa23.09■■□□□ 1.29
SSBP3-202ENST00000357475 EIF4E2O60573 245 aaKnown RBP23.09■■□□□ 1.29
SSBP3-202ENST00000357475 MT-ND1P03886 318 aa23.09■■□□□ 1.29
SSBP3-202ENST00000357475 HTR2AP28223 471 aa23.09■■□□□ 1.29
SSBP3-202ENST00000357475 RGS8P57771 180 aaPredicted RBP23.09■■□□□ 1.29
SSBP3-202ENST00000357475 ACTR3P61158 418 aa23.09■■□□□ 1.29
SSBP3-202ENST00000357475 ARSKQ6UWY0 536 aa23.09■■□□□ 1.29
SSBP3-202ENST00000357475 SLCO4A1Q96BD0 722 aa23.09■■□□□ 1.29
SSBP3-202ENST00000357475 TTTY12Q9BZ98 90 aa23.09■■□□□ 1.29
SSBP3-202ENST00000357475 AMBRA1Q9C0C7 1298 aa23.09■■□□□ 1.29
SSBP3-202ENST00000357475 ZFP64Q9NPA5 681 aa23.09■■□□□ 1.29
SSBP3-202ENST00000357475 ERVH48-1M5A8F1 160 aa23.08■■□□□ 1.29
SSBP3-202ENST00000357475 TCEA1P23193 301 aaKnown RBP23.08■■□□□ 1.29
SSBP3-202ENST00000357475 P2RX1P51575 399 aa23.08■■□□□ 1.29
SSBP3-202ENST00000357475 FOXK1P85037 733 aa23.08■■□□□ 1.29
SSBP3-202ENST00000357475 EPS8Q12929 822 aa23.08■■□□□ 1.29
SSBP3-202ENST00000357475 Q8NA96 180 aa23.08■■□□□ 1.29
SSBP3-202ENST00000357475 ZFP62Q8NB50 900 aaPredicted RBP23.08■■□□□ 1.29
SSBP3-202ENST00000357475 OR4K17Q8NGC6 315 aa23.08■■□□□ 1.29
SSBP3-202ENST00000357475 SLC47A1Q96FL8 570 aa23.08■■□□□ 1.29
SSBP3-202ENST00000357475 ARMC7Q9H6L4 198 aa23.08■■□□□ 1.29
SSBP3-202ENST00000357475 CTPS2Q9NRF8 586 aa23.08■■□□□ 1.29
SSBP3-202ENST00000357475 KLHL28Q9NXS3 571 aa23.08■■□□□ 1.29
SSBP3-202ENST00000357475 C15orf41Q9Y2V0 281 aa23.08■■□□□ 1.29
SSBP3-202ENST00000357475 CACNA1BQ00975 2339 aa23.08■■□□□ 1.29
SSBP3-202ENST00000357475 FAM166BA8MTA8 275 aa23.08■■□□□ 1.28
SSBP3-202ENST00000357475 hCG_2039718K7EN88 272 aa23.08■■□□□ 1.28
SSBP3-202ENST00000357475 GLSO94925 669 aaPredicted RBP23.08■■□□□ 1.28
SSBP3-202ENST00000357475 ENDOUP21128 410 aaKnown RBP23.08■■□□□ 1.28
SSBP3-202ENST00000357475 FUT4P22083 530 aa23.08■■□□□ 1.28
SSBP3-202ENST00000357475 MST1P26927 711 aa23.08■■□□□ 1.28
SSBP3-202ENST00000357475 YAP1P46937 504 aaKnown RBP23.08■■□□□ 1.28
SSBP3-202ENST00000357475 VLDLRP98155 873 aa23.08■■□□□ 1.28
SSBP3-202ENST00000357475 OR5W2Q8NH69 310 aa23.08■■□□□ 1.28
SSBP3-202ENST00000357475 GPR119Q8TDV5 335 aa23.08■■□□□ 1.28
SSBP3-202ENST00000357475 GEMIN6Q8WXD5 167 aaKnown RBP23.08■■□□□ 1.28
SSBP3-202ENST00000357475 C7orf34Q96L11 122 aa23.08■■□□□ 1.28
SSBP3-202ENST00000357475 TAAR6Q96RI8 345 aa23.08■■□□□ 1.28
SSBP3-202ENST00000357475 BOKQ9UMX3 212 aaPredicted RBP23.08■■□□□ 1.28
SSBP3-202ENST00000357475 DHRS12A0PJE2 317 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 ANKUB1A6NFN9 424 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 SHISA8B8ZZ34 492 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 J3KTA2 159 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 ENTPD5O75356 428 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 NUDT14O95848 222 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 CELA3AP09093 270 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 IQCCQ4KMZ1 466 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 RSRC1Q96IZ7 334 aaKnown RBP23.07■■□□□ 1.28
SSBP3-202ENST00000357475 SLC25A18Q9H1K4 315 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 UBQLN3Q9H347 655 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 ZNF703Q9H7S9 590 aaPredicted RBP23.07■■□□□ 1.28
SSBP3-202ENST00000357475 ANAPC2Q9UJX6 822 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 AURKCQ9UQB9 309 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 VDAC3Q9Y277 283 aa23.07■■□□□ 1.28
SSBP3-202ENST00000357475 SLC9A8Q9Y2E8 581 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms