RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 RFWD2Q8NHY2 731 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 ROBO4Q8WZ75 1007 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 ZBTB8AQ96BR9 441 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 DTNBP1Q96EV8 351 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 LRRC46Q96FV0 321 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 PRPF18Q99633 342 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 ACBD3Q9H3P7 528 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 SLC6A13Q9NSD5 602 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 AIG1Q9NVV5 245 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 C6orf203Q9P0P8 240 aaPredicted RBP14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 DTNAQ9Y4J8 743 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 CLDN24A6NM45 220 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 ZNF195O14628 629 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 ADAM11O75078 769 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 HPGDP15428 266 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 PRKCAP17252 672 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 ATP6V1C1P21283 382 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 CD79BP40259 229 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 PEX19P40855 299 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 OCRLQ01968 901 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 ARHGAP11BQ3KRB8 267 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 SLC9B1Q4ZJI4 515 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 HHATQ5VTY9 493 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 ANKRD34AQ69YU3 496 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 OR2A2Q6IF42 318 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 MISPQ8IVT2 679 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 MIPOL1Q8TD10 442 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 ARL8AQ96BM9 186 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 MOAP1Q96BY2 351 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 HS3ST6Q96QI5 342 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 ZNF350Q9GZX5 532 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 QRSL1Q9H0R6 528 aaKnown RBP14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 CXXC4Q9H2H0 198 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 GPR45Q9Y5Y3 372 aa14.96□□□□□ -0.01
PDLIM7-201ENST00000355572 PRSS51A0A1B0GVH4 220 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 E9PBE3 544 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 ATE1O95260 518 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 H6PDO95479 791 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 THBDP07204 575 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 DDX5P17844 614 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 EDNRAP25101 427 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 UGT2B10P36537 528 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 EEFSECP57772 596 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 RPS3AP61247 264 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 SKP2Q13309 424 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 ZNF141Q15928 474 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 HBMQ6B0K9 141 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 TYW3Q6IPR3 259 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 PAMR1Q6UXH9 720 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 FRRS1Q6ZNA5 592 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 FAM214BQ7L5A3 538 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 MTERF4Q7Z6M4 381 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 LILRA2Q8N149 483 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 ATP6V1C2Q8NEY4 427 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 ABHD3Q8WU67 409 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 OSTF1Q92882 214 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 KLHL15Q96M94 604 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 DACH2Q96NX9 599 aa14.95□□□□□ -0.02
PDLIM7-201ENST00000355572 IGHV3-15A0A0B4J1V0 119 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 A0A1W2PNR3 127 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 SERINC4A6NH21 518 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 DYNC1I1O14576 645 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 DNAJA2O60884 412 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 SS18L1O75177 396 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 CD8BP10966 210 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 UBL4AP11441 157 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 POU2F1P14859 743 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 UQCRC2P22695 453 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 QPRTQ15274 297 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 MAPK11Q15759 364 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 ZNF239Q16600 458 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 COX20Q5RI15 118 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 NUFIP2Q7Z417 695 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 KRTAP1-3Q8IUG1 177 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 XAGE5Q8WWM1 108 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 NEURL3Q96EH8 262 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 ZC3HAV1LQ96H79 300 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 CCDC115Q96NT0 180 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 OR52B2Q96RD2 323 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 FOXC2Q99958 501 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 SLC35A5Q9BS91 424 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 NMUR2Q9GZQ4 415 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 ING1Q9UK53 422 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 PROCRQ9UNN8 238 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 VPS13CQ709C8 3753 aa14.94□□□□□ -0.02
PDLIM7-201ENST00000355572 DSCAMO60469 2012 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 UQCRHLA0A096LP55 91 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 GTPBP1O00178 669 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 ETV2O00321 342 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 HMGN4O00479 90 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 ZNF264O43296 627 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 KIAA0513O60268 411 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 NUDT14O95848 222 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 GSNP06396 782 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 KRT16P08779 473 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 CCR4P51679 360 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 EXOC3L2Q2M3D2 409 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 TMEM176BQ3YBM2 270 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 GTDC1Q4AE62 458 aa14.93□□□□□ -0.02
PDLIM7-201ENST00000355572 SLC25A53Q5H9E4 307 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms