RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SEMA4FO95754 770 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 CHRNB4P30926 498 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 HTR3AP46098 478 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 TAS2R19P59542 299 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 WDTC1Q8N5D0 677 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 IL1F10Q8WWZ1 152 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 RAB39BQ96DA2 213 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 PRRC1Q96M27 445 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 TXNRD2Q9NNW7 524 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 PLEK2Q9NYT0 353 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 SLC35A3Q9Y2D2 325 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 SULT2B1O00204 365 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 FANCGO15287 622 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 ZNF217O75362 1048 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 LIPCP11150 499 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 ITGAMP11215 1152 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 CD6P30203 668 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 UPRTQ96BW1 309 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 C4orf36Q96KX1 117 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 C1QTNF2Q9BXJ5 285 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 INPP5EQ9NRR6 644 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 PRSS56P0CW18 603 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 KITLGP21583 273 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 PKLRP30613 574 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 HNRNPFP52597 415 aaKnown RBP14□□□□□ -0.17
LMX1B-201ENST00000355497 ACY1Q03154 408 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 LETMD1Q6P1Q0 360 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 MITD1Q8WV92 249 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 ADAMTS14Q8WXS8 1223 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 FOXJ1Q92949 421 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 SLC30A3Q99726 388 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 DDX31Q9H8H2 851 aaKnown RBP14□□□□□ -0.17
LMX1B-201ENST00000355497 SLCO3A1Q9UIG8 710 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 MCTS1Q9ULC4 181 aaKnown RBP14□□□□□ -0.17
LMX1B-201ENST00000355497 VDAC3Q9Y277 283 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 LOC105369274A0A096LPK9 316 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 ARAFP10398 606 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 RUNX3Q13761 415 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 GPR19Q15760 415 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 PAGE3Q5JUK9 113 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 BRICD5Q6PL45 260 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 OR4N4Q8N0Y3 316 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 MIB2Q96AX9 1013 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 SORCS2Q96PQ0 1159 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 HRH4Q9H3N8 390 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 CPNE7Q9UBL6 633 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 UNCXA6NJT0 531 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 OR2T1O43869 369 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 MED6O75586 246 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 TIMP2P16035 220 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 CD70P32970 193 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 GMPRP36959 345 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 SFRP5Q5T4F7 317 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 SLC22A25Q6T423 547 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 FBXW12Q6X9E4 464 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.99□□□□□ -0.17
LMX1B-201ENST00000355497 ZNF761Q86XN6 746 aaPredicted RBP13.99□□□□□ -0.17
LMX1B-201ENST00000355497 OR51B6Q9H340 312 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 SGCEO43556 437 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 SDC3O75056 442 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 SERPINA2P20848 420 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 MAGEB1P43366 347 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 SERPINA11Q86U17 422 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 CD163Q86VB7 1156 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 C12orf76Q8N812 135 aaPredicted RBP13.99□□□□□ -0.17
LMX1B-201ENST00000355497 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.99□□□□□ -0.17
LMX1B-201ENST00000355497 ACVR1CQ8NER5 493 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 OR5AR1Q8NGP9 310 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 SNED1Q8TER0 1413 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 RSPRY1Q96DX4 576 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 UBXN10Q96LJ8 280 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 MAP3K3Q99759 626 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 SAP130Q9H0E3 1048 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 WDR6Q9NNW5 1121 aaKnown RBP13.99□□□□□ -0.17
LMX1B-201ENST00000355497 DCAF13Q9NV06 445 aaKnown RBP13.99□□□□□ -0.17
LMX1B-201ENST00000355497 C10orf71Q711Q0 1435 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 MEIOCA2RUB1 952 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 SURF4O15260 269 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 NFYAP23511 347 aaPredicted RBP13.99□□□□□ -0.17
LMX1B-201ENST00000355497 CLDN6P56747 220 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 CXADRP78310 365 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 MSMO1Q15800 293 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 HYAL4Q2M3T9 481 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 OR52W1Q6IF63 320 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 PIWIL3Q7Z3Z3 882 aaKnown RBP13.99□□□□□ -0.17
LMX1B-201ENST00000355497 OR6T1Q8NGN1 323 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 GIFP27352 417 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 ATP1B3P54709 279 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 OR5L1Q8NGL2 311 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 LMO3Q8TAP4 145 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 CDS1Q92903 461 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 SLC19A3Q9BZV2 496 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 EGLN3Q9H6Z9 239 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 PCDHB10Q9UN67 800 aa13.99□□□□□ -0.17
LMX1B-201ENST00000355497 A0A0J9YY10 115 aa13.98□□□□□ -0.17
LMX1B-201ENST00000355497 HIDE1A8MVS5 230 aa13.98□□□□□ -0.17
LMX1B-201ENST00000355497 ITGB2P05107 769 aa13.98□□□□□ -0.17
LMX1B-201ENST00000355497 HLA-DMAP28067 261 aa13.98□□□□□ -0.17
LMX1B-201ENST00000355497 IDUAP35475 653 aa13.98□□□□□ -0.17
LMX1B-201ENST00000355497 RPS18P62269 152 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms