RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 Q9Y3F1 56 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 MYH3P11055 1940 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 MYH15Q9Y2K3 1946 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 FEZF1A0PJY2 475 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 HBE1P02100 147 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 FXYD4P59646 89 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 OR10K2Q6IF99 312 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 FCRLAQ7L513 359 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 GPRIN1Q7Z2K8 1008 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 RAB7BQ96AH8 199 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 ATOH8Q96SQ7 321 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 SEMA4GQ9NTN9 838 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 DVL2O14641 736 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 PIP5K1CO60331 668 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 GPR137BO60478 399 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 CX3CR1P49238 355 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 GALK2Q01415 458 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 CELF5Q8N6W0 485 aaKnown RBP11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 ADAMTS18Q8TE60 1221 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 DPH7Q9BTV6 452 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 ST6GALNAC5Q9BVH7 336 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 KLHL13Q9P2N7 655 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 IER3IP1Q9Y5U9 82 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 COCHO43405 550 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 FBXO24O75426 580 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 HTR3BO95264 441 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 S100A8P05109 93 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 SERPINA7P05543 415 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 PNMTP11086 282 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 RAB4AP20338 218 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 TMEM244Q5VVB8 128 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 FCRLBQ6BAA4 426 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 CLEC14AQ86T13 490 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 KLHDC8AQ8IYD2 350 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 BORCS7Q96B45 105 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 NICN1Q9BSH3 213 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 CRB3Q9BUF7 120 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 CAMK2AQ9UQM7 478 aa11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 PUS1Q9Y606 427 aaKnown RBP eCLIP11.96□□□□□ -0.49
SYNCRIP-201ENST00000355238 PEAK1Q9H792 1746 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 GABRR3A8MPY1 467 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 PLSCR1O15162 318 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 ADRB1P08588 477 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 RNH1P13489 461 aaKnown RBP11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 PLCXD2Q0VAA5 305 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLX4IPQ5VYV7 408 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 RAB39BQ96DA2 213 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR52D1Q9H346 318 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 TDP1Q9NUW8 608 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF281Q9Y2X9 895 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 CBY1Q9Y3M2 126 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 SMLR1H3BR10 107 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF780AO75290 641 aaPredicted RBP11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 CNOT4O95628 575 aaKnown RBP11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 CNR1P21554 472 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 EIF2B1Q14232 305 aaKnown RBP11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 SFXN4Q6P4A7 337 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 RNF111Q6ZNA4 994 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 EID2Q8N6I1 236 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 OR4F15Q8NGB8 312 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 IL17FQ96PD4 163 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 DMRT3Q9NQL9 472 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 TLR9Q9NR96 1032 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 PLEKHM1Q9Y4G2 1056 aa11.96□□□□□ -0.5
SYNCRIP-201ENST00000355238 A0A0U1RQK1 487 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 TTLL8A6PVC2 850 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 BRINP1O60477 761 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 PRSS56P0CW18 603 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 IDUAP35475 653 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 PSMB10P40306 273 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 OC90Q02509 493 aaPredicted RBP11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 GBX1Q14549 363 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 CD163Q86VB7 1156 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 ZNF583Q96ND8 569 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 BOCQ9BWV1 1114 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 OCEL1Q9H607 264 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 KCNIP1Q9NZI2 227 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 WASH4PA8MWX3 477 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLC1A3P43003 542 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 SPINT3P49223 89 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 CLDN6P56747 220 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 PSPHP78330 225 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 MRPL49Q13405 166 aaKnown RBP11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 UPP1Q16831 310 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 C20orf85Q9H1P6 137 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 FBXL12Q9NXK8 326 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 SLAMF8Q9P0V8 285 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 A0A0B4J2A0 478 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 SERPINE2P07093 398 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 RAC2P15153 192 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 POLR2IP36954 125 aaKnown RBP11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 RACK1P63244 317 aaKnown RBP11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 STK11Q15831 433 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 IER5LQ5T953 404 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 HIST2H3AQ71DI3 136 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 CDRT4Q8N9R6 151 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 SDR9C7Q8NEX9 313 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 BBS1Q8NFJ9 593 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 TAAR8Q969N4 342 aa11.95□□□□□ -0.5
SYNCRIP-201ENST00000355238 PLEKHJ1Q9NW61 149 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms