RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 ANKRD34CP0C6C1 535 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 AVPR1BP47901 424 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 SRP9P49458 86 aaKnown RBP9.4□□□□□ -0.9
SYNE1-203ENST00000354674 RORCP51449 518 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 EEFSECP57772 596 aaKnown RBP9.4□□□□□ -0.9
SYNE1-203ENST00000354674 HLA-BQ31612 363 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 KHDRBS2Q5VWX1 349 aaKnown RBP9.4□□□□□ -0.9
SYNE1-203ENST00000354674 FBXO42Q6P3S6 717 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 GPALPP1Q8IXQ4 340 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 RSC1A1Q92681 617 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 EXOSC8Q96B26 276 aaKnown RBP9.4□□□□□ -0.9
SYNE1-203ENST00000354674 OTULINQ96BN8 352 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 SGK3Q96BR1 496 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 TM4SF19Q96DZ7 209 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 LOXL4Q96JB6 756 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 OR51B5Q9H339 312 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 SLC6A13Q9NSD5 602 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 C14orf105Q9NVL8 296 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 HEATR5BQ9P2D3 2071 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 A0A0J9YY10 115 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 PRMT3O60678 531 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 F12P00748 615 aaPredicted RBP9.4□□□□□ -0.9
SYNE1-203ENST00000354674 CD63P08962 238 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 PRKAR1AP10644 381 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 TACR1P25103 407 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 TIA1P31483 386 aaKnown RBP eCLIP9.4□□□□□ -0.9
SYNE1-203ENST00000354674 CAPZBP47756 277 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 RPS15AP62244 130 aaKnown RBP9.4□□□□□ -0.9
SYNE1-203ENST00000354674 ACSM2AQ08AH3 577 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 SEC23BQ15437 767 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 SSX1Q16384 188 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 CPZQ66K79 652 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 ACSM2BQ68CK6 577 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 ZNF761Q86XN6 746 aaPredicted RBP9.4□□□□□ -0.9
SYNE1-203ENST00000354674 C1orf52Q8N6N3 182 aaKnown RBP9.4□□□□□ -0.9
SYNE1-203ENST00000354674 RELL2Q8NC24 303 aaPredicted RBP9.4□□□□□ -0.9
SYNE1-203ENST00000354674 OR10G6Q8NH81 332 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 BAHD1Q8TBE0 780 aaPredicted RBP9.4□□□□□ -0.9
SYNE1-203ENST00000354674 RHOVQ96L33 236 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 LDAHQ9H6V9 325 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 RNF215Q9Y6U7 377 aa9.4□□□□□ -0.9
SYNE1-203ENST00000354674 LRIT2A6NDA9 550 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 TMEM200CA6NKL6 621 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 SULT1B1O43704 296 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 SSNA1O43805 119 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 EEDO75530 441 aaKnown RBP9.4□□□□□ -0.91
SYNE1-203ENST00000354674 ACAA1P09110 424 aaPredicted RBP9.4□□□□□ -0.91
SYNE1-203ENST00000354674 ZNF3P17036 446 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 DRD5P21918 477 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 PTBP1P26599 531 aaKnown RBP eCLIP9.4□□□□□ -0.91
SYNE1-203ENST00000354674 G0S2P27469 103 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 FEN1P39748 380 aaKnown RBP9.4□□□□□ -0.91
SYNE1-203ENST00000354674 SNRPEP62304 92 aaKnown RBP9.4□□□□□ -0.91
SYNE1-203ENST00000354674 TNFRSF17Q02223 184 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 RBBP4Q09028 425 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 NPRL3Q12980 569 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 FAM180BQ6P0A1 224 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 FIGLAQ6QHK4 219 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 COMMD6Q7Z4G1 85 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 UBE3DQ7Z6J8 389 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 SLC35F3Q8IY50 421 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 TBC1D19Q8N5T2 526 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 MOSPD2Q8NHP6 518 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 NT5CQ8TCD5 201 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 WDR89Q96FK6 387 aaPredicted RBP9.4□□□□□ -0.91
SYNE1-203ENST00000354674 MRPL48Q96GC5 212 aaKnown RBP9.4□□□□□ -0.91
SYNE1-203ENST00000354674 SFXN2Q96NB2 322 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 SORCS2Q96PQ0 1159 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 OR2A5Q96R48 311 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 ABCG4Q9H172 646 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 LHX9Q9NQ69 397 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 SLC39A1Q9NY26 324 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 EPHA6Q9UF33 1036 aa9.4□□□□□ -0.91
SYNE1-203ENST00000354674 SNRNP200O75643 2136 aaKnown RBP9.39□□□□□ -0.91
SYNE1-203ENST00000354674 ELOVL7A1L3X0 281 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 PLPP1O14494 284 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 GALR2O43603 387 aaPredicted RBP9.39□□□□□ -0.91
SYNE1-203ENST00000354674 ALDOBP05062 364 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 GLB1P16278 677 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 SDC2P34741 201 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 BSGP35613 385 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 TMEM35AQ53FP2 167 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 KLHL22Q53GT1 634 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 CNIH2Q6PI25 160 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 RNF44Q7L0R7 432 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 GPR155Q7Z3F1 870 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 VN1R4Q7Z5H5 301 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 ADCK2Q7Z695 626 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 B3GNT7Q8NFL0 401 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 DUSP23Q9BVJ7 150 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 DPY30Q9C005 99 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 SEMA6CQ9H3T2 930 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 CCNB1IP1Q9NPC3 277 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 MRTO4Q9UKD2 239 aaKnown RBP9.39□□□□□ -0.91
SYNE1-203ENST00000354674 ADAM29Q9UKF5 820 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 TRABD2BA6NFA1 517 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 CTSVO60911 334 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 CREG1O75629 220 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 GPR3P46089 330 aa9.39□□□□□ -0.91
SYNE1-203ENST00000354674 HSD17B7P56937 341 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms