RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TM9SF4Q92544 642 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ATXN7L3BQ96GX2 97 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 MED30Q96HR3 178 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 PNNQ9H307 717 aaKnown RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 NT5DC2Q9H857 520 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 DDX31Q9H8H2 851 aaKnown RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 BEX1Q9HBH7 125 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 SDF2L1Q9HCN8 221 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 TEX10Q9NXF1 929 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 NUDT4Q9NZJ9 180 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 GCNT4Q9P109 453 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 KLK11Q9UBX7 282 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 MAN1B1Q9UKM7 699 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 MRPS18CQ9Y3D5 142 aaKnown RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 RHBDD3Q9Y3P4 386 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CMYA5Q8N3K9 4069 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 LTBP2Q14767 1821 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 INSRP06213 1382 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CCDC7Q96M83 1385 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 KIR2DL5BA0A0G2JN68 375 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 KIR2DL5BA0A0G2JPC4 375 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 KIF2AO00139 706 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CLDN5O00501 218 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 TRAFD1O14545 582 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CYB561D2O14569 222 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CDH16O75309 829 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ATP1A1P05023 1023 aaKnown RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ALPIP09923 528 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF23P17027 643 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 MMP12P39900 470 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CDKN2AP42771 156 aaKnown RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 PAX9P55771 341 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ASPHQ12797 758 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 TAF13Q15543 124 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 EXOC3L2Q2M3D2 409 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ACER2Q5QJU3 275 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 SEL1L3Q68CR1 1132 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 HOGA1Q86XE5 327 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 KIR2DL5AQ8N109 375 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 OR2L13Q8N349 312 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 KIR2DL5BQ8NHK3 375 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 RAPGEF5Q92565 580 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 NRGNQ92686 78 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 PANX2Q96RD6 677 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CPXM1Q96SM3 734 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 C11orf70Q9BRQ4 267 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 MCRIP2Q9BUT9 160 aaKnown RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ST6GALNAC5Q9BVH7 336 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF160Q9HCG1 818 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 INPP5EQ9NRR6 644 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ELF5Q9UKW6 265 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 VANGL2Q9ULK5 521 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 PIGLQ9Y2B2 252 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 EXOGQ9Y2C4 368 aaKnown RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 WDR45Q9Y484 360 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 SLCO1B1Q9Y6L6 691 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 COL1A1P02452 1464 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 SCN11AQ9UI33 1791 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 UMODL1Q5DID0 1318 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ACOD1A6NK06 481 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CCT8L1PA6NM43 557 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 SUPT3HB4E1H0 165 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 H0Y8G0 127 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 H0YIV9 168 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 SIVA1O15304 175 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 RHOBTB1O94844 696 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ANP32DO95626 131 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CLPTM1O96005 669 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CRYAAP02489 173 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ANXA5P08758 320 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 AMD1P17707 334 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 TBXA2RP21731 343 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 EDNRAP25101 427 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 MSNP26038 577 aaKnown RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CAPGP40121 348 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 GNPDA1P46926 289 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ACY1Q03154 408 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 DMTNQ08495 405 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 TPD52L1Q16890 204 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 KIAA1644Q3SXP7 199 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CTSL3PQ5NE16 218 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 MBOAT1Q6ZNC8 495 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 NANOGNBQ7Z5D8 188 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 TMCO2Q7Z6W1 182 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 GTPBP8Q8N3Z3 284 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CSNK1A1LQ8N752 337 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 FAM86B1Q8N7N1 296 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 KCNH5Q8NCM2 988 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 OR2T6Q8NHC8 308 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 KIFAP3Q92845 792 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 DLX4Q92988 240 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 NABP1Q96AH0 204 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 TADA1Q96BN2 335 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 C11orf24Q96F05 449 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 LURAP1Q96LR2 239 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 PRRC1Q96M27 445 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 RPRD1AQ96P16 312 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 SLC6A7Q99884 636 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CCDC28BQ9BUN5 200 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms