RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SMOC1Q9H4F8 434 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 TRPC4Q9UBN4 977 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 A0A087WUU8 490 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 FAM240BA0A1B0GVZ2 78 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 TRDV1A0A1B0GX56 115 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 SMLR1H3BR10 107 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 LYRM1O43325 122 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 AKR7A2O43488 359 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 PROM1O43490 865 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 CHRM4P08173 479 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 HIST1H1TP22492 207 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-204ENST00000353317 SSR2P43308 183 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 AVPR1BP47901 424 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 EVX1P49640 407 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 OR1D5P58170 312 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 BTN3A2P78410 334 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 RUNX2Q13950 521 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 MINDY4Q4G0A6 757 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 FAM209AQ5JX71 171 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 CLEC12AQ5QGZ9 265 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 TIGD3Q6B0B8 471 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 SLC27A4Q6P1M0 643 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 PEX5LQ8IYB4 626 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 NATD1Q8N6N6 113 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 PIGKQ92643 395 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 PRRC1Q96M27 445 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 QRFPRQ96P65 431 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 KCNJ15Q99712 375 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 YIPF4Q9BSR8 244 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 GLIPR2Q9H4G4 154 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 ISYNA1Q9NPH2 558 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 CNIH4Q9P003 139 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 SLC9A8Q9Y2E8 581 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 PCDHGB7Q9Y5F8 929 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 IGHV5-51A0A0C4DH38 117 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 A0A0J9YY10 115 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 ZNF860A6NHJ4 632 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 C1QBP02746 253 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 ALPPL2P10696 532 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 CELP19835 753 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 BUD31P41223 144 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-204ENST00000353317 SLC1A3P43003 542 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 PRKAG1P54619 331 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 CTBP2P56545 445 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 RPS15AP62244 130 aaKnown RBP7.98□□□□□ -1.13
TRIM55-204ENST00000353317 SNRPD2P62316 118 aaKnown RBP7.98□□□□□ -1.13
TRIM55-204ENST00000353317 FUT5Q11128 374 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 TNK1Q13470 666 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 DEFB134Q4QY38 66 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 C14orf28Q4W4Y0 310 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 NDUFAF5Q5TEU4 345 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 PRICKLE2Q7Z3G6 844 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 TMPRSS9Q7Z410 1059 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 MRGPREQ86SM8 312 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 ASPGQ86U10 573 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 LSRQ86X29 649 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-204ENST00000353317 NUDT13Q86X67 352 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 ARHGEF39Q8N4T4 335 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 OR4F15Q8NGB8 312 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 OR5T3Q8NGG3 340 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 NEIL3Q8TAT5 605 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 SNAPC3Q92966 411 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 SLC35G5Q96KT7 338 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 GFM1Q96RP9 751 aaKnown RBP7.98□□□□□ -1.13
TRIM55-204ENST00000353317 ELF4Q99607 663 aaPredicted RBP7.98□□□□□ -1.13
TRIM55-204ENST00000353317 MARVELD1Q9BSK0 173 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 IER2Q9BTL4 223 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 TMEM43Q9BTV4 400 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 ZCCHC3Q9NUD5 404 aaKnown RBP7.98□□□□□ -1.13
TRIM55-204ENST00000353317 MCUBQ9NWR8 336 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 KCMF1Q9P0J7 381 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 LRIT1Q9P2V4 623 aa7.98□□□□□ -1.13
TRIM55-204ENST00000353317 EXOSC1Q9Y3B2 195 aaKnown RBP7.98□□□□□ -1.13
TRIM55-204ENST00000353317 RALGAPA1Q6GYQ0 2036 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 LY6G6EA0A0G2JKS1 128 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 C2orf92A0A1B0GVN3 265 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 DVL2O14641 736 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 FRS3O43559 492 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 CH25HO95992 272 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 C8orf89P0DMQ9 161 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 PRKAR1AP10644 381 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 GSTM3P21266 225 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 PPP2R1BP30154 601 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 CAPZBP47756 277 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 CLDN20P56880 219 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 ARPC4P59998 168 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 ZNF155Q12901 538 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-204ENST00000353317 VASNQ6EMK4 673 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 LAMTOR1Q6IAA8 161 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 MZT2BQ6NZ67 158 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 RNF44Q7L0R7 432 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 OOSP2Q86WS3 158 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 PLCZ1Q86YW0 608 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 LINC00471Q8N535 108 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 TMEM52Q8NDY8 209 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 TTLQ8NG68 377 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 OR4M1Q8NGD0 313 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 TEX47Q8TBZ9 253 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 NT5CQ8TCD5 201 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 DEDD2Q8WXF8 326 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms