RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 BAG2O95816 211 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 CST1P01037 141 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 FBXW10Q5XX13 1052 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 TOR1AIP2Q8NFQ8 470 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 SH3YL1Q96HL8 342 aaPredicted RBP24.69■■□□□ 1.54
SSBP4-202ENST00000348495 KLHDC3Q9BQ90 382 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 NTN4Q9HB63 628 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 TIMMDC1Q9NPL8 285 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 NTNG1Q9Y2I2 539 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 FAM32AQ9Y421 112 aaKnown RBP24.69■■□□□ 1.54
SSBP4-202ENST00000348495 PCDHGA9Q9Y5G4 932 aaKnown RBP24.69■■□□□ 1.54
SSBP4-202ENST00000348495 HEATR5AQ86XA9 2040 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 CNTRLQ7Z7A1 2325 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 DEAF1O75398 565 aaPredicted RBP24.69■■□□□ 1.54
SSBP4-202ENST00000348495 LDLRP01130 860 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 P04436 131 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 AMIGO2Q86SJ2 522 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 WDSUB1Q8N9V3 476 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 PRRC1Q96M27 445 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 ZNF559Q9BR84 538 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 HHATLQ9HCP6 504 aa24.69■■□□□ 1.54
SSBP4-202ENST00000348495 FAAHO00519 579 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 SLC25A12O75746 678 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 SNX4O95219 450 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 FUT4P22083 530 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 P2RX1P51575 399 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 PIN1Q13526 163 aaPredicted RBP24.68■■□□□ 1.54
SSBP4-202ENST00000348495 COL28A1Q2UY09 1125 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 ENTPD8Q5MY95 495 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 BORAQ6PGQ7 559 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 LSMEM1Q8N8F7 131 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 OR5W2Q8NH69 310 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 B4GALNT2Q8NHY0 566 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 CENPNQ96H22 339 aaPredicted RBP24.68■■□□□ 1.54
SSBP4-202ENST00000348495 DHRS1Q96LJ7 313 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 POLR2J2Q9GZM3 115 aaKnown RBP24.68■■□□□ 1.54
SSBP4-202ENST00000348495 POLR2J3Q9H1A7 115 aaKnown RBP24.68■■□□□ 1.54
SSBP4-202ENST00000348495 VNN3Q9NY84 501 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 PPP4R1LQ9P1A2 415 aa24.68■■□□□ 1.54
SSBP4-202ENST00000348495 RYKP34925 604 aa24.67■■□□□ 1.54
SSBP4-202ENST00000348495 INPP5JQ15735 1006 aaPredicted RBP24.67■■□□□ 1.54
SSBP4-202ENST00000348495 OR5M10Q6IEU7 315 aa24.67■■□□□ 1.54
SSBP4-202ENST00000348495 CYP4Z1Q86W10 505 aa24.67■■□□□ 1.54
SSBP4-202ENST00000348495 TMCO5AQ8N6Q1 288 aa24.67■■□□□ 1.54
SSBP4-202ENST00000348495 KDF1Q8NAX2 398 aaPredicted RBP24.67■■□□□ 1.54
SSBP4-202ENST00000348495 TMEM41AQ96HV5 264 aa24.67■■□□□ 1.54
SSBP4-202ENST00000348495 DEPPQ9NTK1 212 aa24.67■■□□□ 1.54
SSBP4-202ENST00000348495 A0A0G2JMM0 328 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 A0A1W2PPB8 328 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 A0A1W2PRS3 328 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 KIR3DP1A8MWS1 328 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 TRIM3O75382 744 aaPredicted RBP24.66■■□□□ 1.54
SSBP4-202ENST00000348495 MSX1P28360 303 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 SLC6A8P48029 635 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 SUMO3P55854 103 aaPredicted RBP24.66■■□□□ 1.54
SSBP4-202ENST00000348495 ARG2P78540 354 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 SLC34A1Q06495 639 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 PIK3C3Q8NEB9 887 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 ADAMTS16Q8TE57 1224 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 NR4A3Q92570 626 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 ZNF524Q96C55 264 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 NMNAT1Q9HAN9 279 aaPredicted RBP24.66■■□□□ 1.54
SSBP4-202ENST00000348495 CPSF4LA6NMK7 179 aaKnown RBP24.66■■□□□ 1.54
SSBP4-202ENST00000348495 G3V3Y1 287 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 ADAMDEC1O15204 470 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 THY1P04216 161 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 LINGO3P0C6S8 592 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 CCR4P51679 360 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 GANABQ14697 944 aaKnown RBP24.66■■□□□ 1.54
SSBP4-202ENST00000348495 OR1Q1Q15612 314 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 TBR1Q16650 682 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 OFCC1Q8IZS5 231 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 FADS6Q8N9I5 356 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 BDH2Q9BUT1 245 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 TRIM2Q9C040 744 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 SEMA6AQ9H2E6 1030 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 CTPS2Q9NRF8 586 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 ACER3Q9NUN7 267 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 RHCGQ9UBD6 479 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 TESMINQ9Y4I5 508 aa24.66■■□□□ 1.54
SSBP4-202ENST00000348495 SNPHO15079 494 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 OR5F1O95221 314 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 CNR1P21554 472 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 RRM2P31350 389 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 ZNF613Q6PF04 617 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 IGFL3Q6UXB1 125 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 PLEKHM3Q6ZWE6 761 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 PACS2Q86VP3 889 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 GPR119Q8TDV5 335 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 MAN2C1Q9NTJ4 1040 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 MED11Q9P086 117 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 PRDM4Q9UKN5 801 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 LAMA5O15230 3695 aa24.65■■□□□ 1.54
SSBP4-202ENST00000348495 ANKUB1A6NFN9 424 aa24.64■■□□□ 1.54
SSBP4-202ENST00000348495 MST1P26927 711 aa24.64■■□□□ 1.54
SSBP4-202ENST00000348495 DNASE1L1P49184 302 aa24.64■■□□□ 1.54
SSBP4-202ENST00000348495 TNFSF10P50591 281 aa24.64■■□□□ 1.54
SSBP4-202ENST00000348495 HMGA2P52926 109 aa24.64■■□□□ 1.54
SSBP4-202ENST00000348495 TAS2R41P59536 307 aa24.64■■□□□ 1.54
SSBP4-202ENST00000348495 CBFBQ13951 182 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms