RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 SIAH3Q8IW03 269 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 FAM98AQ8NCA5 519 aaKnown RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 OR2T35Q8NGX2 323 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 SFXN5Q8TD22 340 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 HAVCR2Q8TDQ0 301 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 PTP4A1Q93096 173 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 WBP1Q96G27 269 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 ABHD1Q96SE0 405 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 IFT27Q9BW83 186 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 RHBGQ9H310 441 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 ADAM29Q9UKF5 820 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 TMEM5Q9Y2B1 443 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 GPR52Q9Y2T5 361 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 LOC105369274A0A096LPK9 316 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 A0A1B0GUH1 482 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 A0A1B0GW55 424 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 A0A1W2PPC1 479 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 ZNF593O00488 134 aaPredicted RBP14.77□□□□□ -0.05
HMGA1-202ENST00000347617 PGRMC2O15173 223 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 ZNF749O43361 778 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 SERPINA3P01011 423 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 GIPP09681 153 aaPredicted RBP14.77□□□□□ -0.05
HMGA1-202ENST00000347617 DUX4L2P0CJ85 424 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 DUX4L3P0CJ86 424 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 DUX4L4P0CJ87 422 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 DUX4L5P0CJ88 424 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 DUX4L6P0CJ89 424 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 DUX4L7P0CJ90 424 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 TYRP1P17643 537 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 PAICSP22234 425 aaKnown RBP14.77□□□□□ -0.05
HMGA1-202ENST00000347617 TPMTP51580 245 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 MAP2K6P52564 334 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 TAS2R41P59536 307 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 AP3S2P59780 193 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 RAP2BP61225 183 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 ZNF273Q14593 569 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 KIAA1161Q6NSJ0 714 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 KIAA1324Q6UXG2 1013 aaKnown RBP14.77□□□□□ -0.05
HMGA1-202ENST00000347617 TMEM64Q6YI46 380 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 SHFQ7M4L6 423 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 PM20D2Q8IYS1 436 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 OR4N4Q8N0Y3 316 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 HDDC3Q8N4P3 179 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 OR6T1Q8NGN1 323 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 OR2L2Q8NH16 312 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 ASB12Q8WXK4 309 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 RGMAQ96B86 450 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 MOAP1Q96BY2 351 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 TM4SF18Q96CE8 201 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 OR51I1Q9H343 314 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 PLEKHA1Q9HB21 404 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 SLAMF7Q9NQ25 335 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 NANSQ9NR45 359 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 RPS6KB2Q9UBS0 482 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 DUX4Q9UBX2 424 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 SLC13A4Q9UKG4 626 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 KCNMB2Q9Y691 235 aa14.77□□□□□ -0.05
HMGA1-202ENST00000347617 RANBP2P49792 3224 aaKnown RBP14.76□□□□□ -0.05
HMGA1-202ENST00000347617 TRAV1-2A0A0B4J238 106 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 K7ESM1 405 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 PLPP2O43688 288 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 MT-ND5P03915 603 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 CPN1P15169 458 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 TRIM23P36406 574 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 BLVRAP53004 296 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 TSPAN5P62079 268 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 KLF9Q13886 244 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-202ENST00000347617 MAPK14Q16539 360 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 SYPL1Q16563 259 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 ZNF311Q5JNZ3 666 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 KHDRBS2Q5VWX1 349 aaKnown RBP14.76□□□□□ -0.05
HMGA1-202ENST00000347617 HSD17B13Q7Z5P4 300 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-202ENST00000347617 NAXDQ8IW45 347 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 OR6V1Q8N148 313 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 SLC44A3Q8N4M1 653 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 EIF4E3Q8N5X7 224 aaKnown RBP14.76□□□□□ -0.05
HMGA1-202ENST00000347617 DACT3Q96B18 629 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-202ENST00000347617 ARHGDIGQ99819 225 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 TEX101Q9BY14 249 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 PITHD1Q9GZP4 211 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-202ENST00000347617 PELI2Q9HAT8 420 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 CALML5Q9NZT1 146 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 KCMF1Q9P0J7 381 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 FBXO9Q9UK97 447 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-202ENST00000347617 BAIAP2Q9UQB8 552 aa14.76□□□□□ -0.05
HMGA1-202ENST00000347617 A8MXK9 166 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 AGRPO00253 132 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 ALPPL2P10696 532 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 PRKACAP17612 351 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 SSTR2P30874 369 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 OMPP47874 163 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 PREPP48147 710 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 RPS21P63220 83 aaKnown RBP14.75□□□□□ -0.05
HMGA1-202ENST00000347617 SNTB2Q13425 540 aaKnown RBP14.75□□□□□ -0.05
HMGA1-202ENST00000347617 RGS7BPQ6MZT1 257 aaPredicted RBP14.75□□□□□ -0.05
HMGA1-202ENST00000347617 ADCK2Q7Z695 626 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 PXKQ7Z7A4 578 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 NR2C2APQ86WQ0 139 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 ZBTB44Q8NCP5 570 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 OR2T33Q8NG76 320 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms