RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 OLIG3Q7RTU3 272 aa14.59□□□□□ -0.07
RAB5C-201ENST00000346213 MICU2Q8IYU8 434 aa14.59□□□□□ -0.07
RAB5C-201ENST00000346213 NUP43Q8NFH3 380 aa14.59□□□□□ -0.07
RAB5C-201ENST00000346213 OR1J4Q8NGS1 313 aa14.59□□□□□ -0.07
RAB5C-201ENST00000346213 ACSS1Q9NUB1 689 aaPredicted RBP14.59□□□□□ -0.07
RAB5C-201ENST00000346213 ACAD8Q9UKU7 415 aa14.59□□□□□ -0.07
RAB5C-201ENST00000346213 KLF2Q9Y5W3 355 aaPredicted RBP14.59□□□□□ -0.07
RAB5C-201ENST00000346213 FREM3P0C091 2139 aa14.59□□□□□ -0.07
RAB5C-201ENST00000346213 AKAP9Q99996 3911 aa14.59□□□□□ -0.07
RAB5C-201ENST00000346213 ABCA12Q86UK0 2595 aa14.59□□□□□ -0.07
RAB5C-201ENST00000346213 CLIC1O00299 241 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 BCKDKO14874 412 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 GSTA4O15217 222 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 ZIC3O60481 467 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 CLDN14O95500 239 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 CPSF4O95639 269 aaKnown RBP14.58□□□□□ -0.07
RAB5C-201ENST00000346213 IFI6P09912 130 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 EVI2BP34910 448 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 PNLIPRP2P54317 469 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 MANFP55145 182 aaKnown RBP14.58□□□□□ -0.07
RAB5C-201ENST00000346213 GFRA1P56159 465 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 VASNQ6EMK4 673 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 HMBOX1Q6NT76 420 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 XKRXQ6PP77 449 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 SERPINA11Q86U17 422 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 MARCH3Q86UD3 253 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 ZNF295-AS1Q8N0V1 137 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 GOT1L1Q8NHS2 421 aaPredicted RBP14.58□□□□□ -0.07
RAB5C-201ENST00000346213 POP5Q969H6 163 aaKnown RBP14.58□□□□□ -0.07
RAB5C-201ENST00000346213 RMND5BQ96G75 393 aaPredicted RBP14.58□□□□□ -0.07
RAB5C-201ENST00000346213 AURKBQ96GD4 344 aaPredicted RBP14.58□□□□□ -0.07
RAB5C-201ENST00000346213 WDYHV1Q96HA8 205 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 OR2B2Q9GZK3 357 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 AURKCQ9UQB9 309 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 OR10H1Q9Y4A9 318 aa14.58□□□□□ -0.07
RAB5C-201ENST00000346213 FAM90A27PA6NNH2 459 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 TIPRLO75663 272 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 SLITRK5O94991 958 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 IL33O95760 270 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 FCGR1AP12314 374 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 BMP2P12643 396 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 GPX2P18283 190 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 AGAP20933 346 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 PPIBP23284 216 aaKnown RBP14.58□□□□□ -0.08
RAB5C-201ENST00000346213 IL12BP29460 328 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 GPC1P35052 558 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 RFX3P48380 749 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 STARP49675 285 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 SNTA1Q13424 505 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 ACSF3Q4G176 576 aaPredicted RBP14.58□□□□□ -0.08
RAB5C-201ENST00000346213 C1orf185Q5T7R7 199 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 MTFR2Q6P444 385 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 ZNF621Q6ZSS3 439 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 ANKFN1Q8N957 763 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 FADS6Q8N9I5 356 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 ICA1LQ8NDH6 482 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 OR4C3Q8NH37 302 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 OR5AK3PQ8NH89 298 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 PSMA8Q8TAA3 256 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 FAM110BQ8TC76 370 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 MARVELD3Q96A59 401 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 ZNF524Q96C55 264 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 ZBED6CLQ96FA7 236 aaPredicted RBP14.58□□□□□ -0.08
RAB5C-201ENST00000346213 REXO5Q96IC2 774 aaKnown RBP14.58□□□□□ -0.08
RAB5C-201ENST00000346213 PRDM14Q9GZV8 571 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 EXO5Q9H790 373 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 GPATCH2Q9NW75 528 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 ALKBH4Q9NXW9 302 aa14.58□□□□□ -0.08
RAB5C-201ENST00000346213 CACNA1CQ13936 2221 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 SHISA8B8ZZ34 492 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 H0YC42 278 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 CXCR6O00574 342 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 UTS2O95399 124 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 FASP25445 335 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 AQP4P55087 323 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 TPD52P55327 224 aaPredicted RBP14.57□□□□□ -0.08
RAB5C-201ENST00000346213 CLDN15P56746 228 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 RPS26P62854 115 aaKnown RBP14.57□□□□□ -0.08
RAB5C-201ENST00000346213 HBA1P69905 142 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 MLC1Q15049 377 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 CYP27C1Q4G0S4 372 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 NHSL2Q5HYW2 709 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 FIGNL1Q6PIW4 674 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 B3GNT6Q6ZMB0 384 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 SZRD1Q7Z422 152 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 AMIGO2Q86SJ2 522 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 PLCZ1Q86YW0 608 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 NATD1Q8N6N6 113 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 OR2M3Q8NG83 312 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 OR5M1Q8NGP8 315 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 SLC9A6Q92581 669 aa14.57□□□□□ -0.08
RAB5C-201ENST00000346213 NPIPA5A0A0B4J1W7 369 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 CENPVL1A0A0U1RR11 272 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 A0A1W2PRB8 838 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 NPIPA7E9PJI5 369 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 H0YJX3 145 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 OIP5O43482 229 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 ABCB7O75027 752 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 KCNK2O95069 426 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 HMGN2P05204 90 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms