RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 BTBD16Q32M84 506 aa20.22■□□□□ 0.83
CACNB1-201ENST00000344140 APOOLQ6UXV4 268 aa20.22■□□□□ 0.83
CACNB1-201ENST00000344140 TMEM255BQ8WV15 326 aa20.22■□□□□ 0.83
CACNB1-201ENST00000344140 HDAC2Q92769 488 aaKnown RBP20.22■□□□□ 0.83
CACNB1-201ENST00000344140 MPP4Q96JB8 637 aa20.22■□□□□ 0.83
CACNB1-201ENST00000344140 IMMP1LQ96LU5 166 aa20.22■□□□□ 0.83
CACNB1-201ENST00000344140 PRSS27Q9BQR3 290 aa20.22■□□□□ 0.83
CACNB1-201ENST00000344140 DEFB126Q9BYW3 111 aa20.22■□□□□ 0.83
CACNB1-201ENST00000344140 FAM117AQ9C073 453 aa20.22■□□□□ 0.83
CACNB1-201ENST00000344140 MYOTQ9UBF9 498 aa20.22■□□□□ 0.83
CACNB1-201ENST00000344140 FARSAQ9Y285 508 aaKnown RBP20.22■□□□□ 0.83
CACNB1-201ENST00000344140 A0A1B0GWA3 101 aa20.21■□□□□ 0.83
CACNB1-201ENST00000344140 TMEM200CA6NKL6 621 aa20.21■□□□□ 0.83
CACNB1-201ENST00000344140 ADAM11O75078 769 aa20.21■□□□□ 0.83
CACNB1-201ENST00000344140 CHMP24386 653 aa20.21■□□□□ 0.83
CACNB1-201ENST00000344140 PLAG1Q6DJT9 500 aa20.21■□□□□ 0.83
CACNB1-201ENST00000344140 KIRREL2Q6UWL6 708 aa20.21■□□□□ 0.83
CACNB1-201ENST00000344140 M1APQ8TC57 530 aa20.21■□□□□ 0.83
CACNB1-201ENST00000344140 THAP3Q8WTV1 239 aaPredicted RBP20.21■□□□□ 0.83
CACNB1-201ENST00000344140 HS6ST2Q96MM7 605 aa20.21■□□□□ 0.83
CACNB1-201ENST00000344140 TBL1XR1Q9BZK7 514 aa20.21■□□□□ 0.83
CACNB1-201ENST00000344140 SELENONQ9NZV5 590 aa20.21■□□□□ 0.83
CACNB1-201ENST00000344140 RPS6KB2Q9UBS0 482 aa20.21■□□□□ 0.83
CACNB1-201ENST00000344140 WWP2O00308 870 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 TNFSF15O95150 251 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 LINGO3P0C6S8 592 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 SDHBP21912 280 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 OMPP47874 163 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 LSM11P83369 360 aaKnown RBP eCLIP20.2■□□□□ 0.82
CACNB1-201ENST00000344140 TSPAN31Q12999 210 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 SKP2Q13309 424 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 RSPO4Q2I0M5 234 aaPredicted RBP20.2■□□□□ 0.82
CACNB1-201ENST00000344140 NDUFAF6Q330K2 333 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 RBM48Q5RL73 367 aaKnown RBP20.2■□□□□ 0.82
CACNB1-201ENST00000344140 ULK3Q6PHR2 472 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 NDUFAF7Q7L592 441 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 PRICKLE2Q7Z3G6 844 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 NRMQ8IXM6 262 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 DEPDC4Q8N2C3 294 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 AMER2Q8N7J2 671 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 GATSQ8NAP1 163 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 POGLUT1Q8NBL1 392 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 OR11G2Q8NGC1 345 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 RNF217Q8TC41 542 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 TMEM239Q8WW34 195 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 NACC2Q96BF6 587 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 FAM122AQ96E09 287 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 LAT2Q9GZY6 243 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 ZBTB20Q9HC78 741 aaPredicted RBP20.2■□□□□ 0.82
CACNB1-201ENST00000344140 ELK4P28324 431 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 GSSP48637 474 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 TMED10P49755 219 aaKnown RBP20.2■□□□□ 0.82
CACNB1-201ENST00000344140 TOP3AQ13472 1001 aaPredicted RBP20.2■□□□□ 0.82
CACNB1-201ENST00000344140 SSPNQ14714 243 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 PTGES3Q15185 160 aaKnown RBP20.2■□□□□ 0.82
CACNB1-201ENST00000344140 MEP1AQ16819 746 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 C6orf141Q5SZD1 244 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 TMPRSS12Q86WS5 348 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 NLGN4XQ8N0W4 816 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 NLGN4YQ8NFZ3 816 aaPredicted RBP20.2■□□□□ 0.82
CACNB1-201ENST00000344140 TSPAN14Q8NG11 270 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 SLC22A8Q8TCC7 542 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 GRHL3Q8TE85 626 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 DNAJA4Q8WW22 397 aaPredicted RBP20.2■□□□□ 0.82
CACNB1-201ENST00000344140 GPR87Q9BY21 358 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 MRPS26Q9BYN8 205 aaKnown RBP20.2■□□□□ 0.82
CACNB1-201ENST00000344140 MMP25Q9NPA2 562 aa20.2■□□□□ 0.82
CACNB1-201ENST00000344140 TRIM64A6NGJ6 449 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 ZAR1LA6NP61 321 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 C21orf140B9A014 251 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 SOCS6O14544 535 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 NDUFB5O43674 189 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 FADS1O60427 444 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 EIF4E2O60573 245 aaKnown RBP20.19■□□□□ 0.82
CACNB1-201ENST00000344140 NADKO95544 446 aaPredicted RBP20.19■□□□□ 0.82
CACNB1-201ENST00000344140 SMIM18P0DKX4 95 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 FPR3P25089 353 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 EVI2BP34910 448 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 RBM34P42696 430 aaKnown RBP20.19■□□□□ 0.82
CACNB1-201ENST00000344140 SLC6A8P48029 635 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 CDK5R2Q13319 367 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 CTU2Q2VPK5 515 aaKnown RBP20.19■□□□□ 0.82
CACNB1-201ENST00000344140 ALG10BQ5I7T1 473 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 DESI1Q6ICB0 168 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 C16orf47Q6ZP98 133 aaPredicted RBP20.19■□□□□ 0.82
CACNB1-201ENST00000344140 Q6ZPB1 254 aaPredicted RBP20.19■□□□□ 0.82
CACNB1-201ENST00000344140 CADM2Q8N3J6 435 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 SLC15A4Q8N697 577 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 BLOC1S6Q9UL45 172 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 CARD8Q9Y2G2 431 aa20.19■□□□□ 0.82
CACNB1-201ENST00000344140 NSG1A0A0A6YYJ2 146 aa20.18■□□□□ 0.82
CACNB1-201ENST00000344140 H3BN98 237 aa20.18■□□□□ 0.82
CACNB1-201ENST00000344140 POU1F1P28069 291 aa20.18■□□□□ 0.82
CACNB1-201ENST00000344140 MAD2L1BPQ15013 274 aaPredicted RBP20.18■□□□□ 0.82
CACNB1-201ENST00000344140 WDR88Q6ZMY6 472 aa20.18■□□□□ 0.82
CACNB1-201ENST00000344140 CCDC71Q8IV32 467 aaPredicted RBP20.18■□□□□ 0.82
CACNB1-201ENST00000344140 TMCO6Q96DC7 493 aa20.18■□□□□ 0.82
CACNB1-201ENST00000344140 FAM46AQ96IP4 442 aaKnown RBP20.18■□□□□ 0.82
CACNB1-201ENST00000344140 GPA33Q99795 319 aa20.18■□□□□ 0.82
CACNB1-201ENST00000344140 ADNPQ9H2P0 1102 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms