RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 COPS3Q9UNS2 423 aa8.99□□□□□ -0.97
HOXA1-201ENST00000343060 RCE1Q9Y256 329 aa8.99□□□□□ -0.97
HOXA1-201ENST00000343060 A0A0B4J203 849 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 GLTPD2A6NH11 291 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 TMEM88BA6NKF7 163 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 NEDD8-MDP1E9PL57 170 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 GABARAPH6UMI1 98 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 BHLHE40O14503 412 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 CDC42EP2O14613 210 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 PTP4A3O75365 173 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 STX11O75558 287 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 AQP8O94778 261 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ATP1B1P05026 303 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ERGP11308 486 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ACADLP28330 430 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 PRKAR1BP31321 381 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 CD96P40200 585 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 RAD52P43351 418 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 CBX5P45973 191 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 SEC61A1P61619 476 aaKnown RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ZNF85Q03923 595 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 SLC3A1Q07837 685 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 IL10RAQ13651 578 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 UBXN2BQ14CS0 331 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 TAF12Q16514 161 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 SFRP5Q5T4F7 317 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 Q6ZVU0 165 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 DPPA4Q7L190 304 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 OVCH1Q7RTY7 1134 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 DGLUCYQ7Z3D6 616 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 GDF7Q7Z4P5 450 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 UBE3DQ7Z6J8 389 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 MCATQ8IVS2 390 aaKnown RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 GANCQ8TET4 914 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 AUTS2Q8WXX7 1259 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ATOH1Q92858 354 aaPredicted RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 KLK6Q92876 244 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 MRPS24Q96EL2 167 aaKnown RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 SEC22CQ9BRL7 303 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 YIPF4Q9BSR8 244 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 DPH7Q9BTV6 452 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 C1QTNF2Q9BXJ5 285 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 CHIAQ9BZP6 476 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ZCCHC2Q9C0B9 1178 aaKnown RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 IL21Q9HBE4 155 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ZNF334Q9HCZ1 680 aaPredicted RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 EXOSC3Q9NQT5 275 aaKnown RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 KLHL1Q9NR64 748 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 NKIRAS2Q9NYR9 191 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ATPIF1Q9UII2 106 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 SLC25A13Q9UJS0 675 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 DENND4CQ5VZ89 1909 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 A0A0A6YYD5 115 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ZC3H12DA2A288 527 aaKnown RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 SLC22A31A6NKX4 558 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 LGALS8O00214 317 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 KIAA0355O15063 1070 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ARPC1BO15143 372 aaKnown RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 FLRT2O43155 660 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 SEPT4O43236 478 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 FRS3O43559 492 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 SERPINA3P01011 423 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 UCHL1P09936 223 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 H2AFB1P0C5Y9 115 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 NT5EP21589 574 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 XPAP23025 273 aaPredicted RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 MAPK3P27361 379 aaPredicted RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 AHRP35869 848 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 FXYD6P3P58550 94 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 TAS2R38P59533 333 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 KIAA1024LP59773 190 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 GK2Q14410 553 aaPredicted RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 OR5M10Q6IEU7 315 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ALKAL2Q6UX46 152 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 C17orf99Q6UX52 265 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ESPNLQ6ZVH7 1005 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 TMUB2Q71RG4 321 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 PRSS45Q7RTY3 260 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 OR5M9Q8NGP3 310 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 OR2A12Q8NGT7 310 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 COQ8AQ8NI60 647 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ZNF461Q8TAF7 563 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 ZFPM2Q8WW38 1151 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 PNPLA2Q96AD5 504 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 MOAP1Q96BY2 351 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 SLC41A3Q96GZ6 507 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 DMRTA2Q96SC8 542 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 TBX5Q99593 518 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 VN1R3Q9BXE9 311 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 QRSL1Q9H0R6 528 aaKnown RBP8.98□□□□□ -0.97
HOXA1-201ENST00000343060 OR10A4Q9H209 315 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 MCCC2Q9HCC0 563 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 SLC35C2Q9NQQ7 365 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 GPR160Q9UJ42 338 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 GMEB2Q9UKD1 530 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 KCNK7Q9Y2U2 307 aa8.98□□□□□ -0.97
HOXA1-201ENST00000343060 TCRBV16S1A1N1A0A5B0 115 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 ANXA2P2A6NMY6 339 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 D6RAR5 112 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 GRM6O15303 877 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms