RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 MAGED1Q9Y5V3 778 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-202ENST00000342494 A0A0G2JMP0 313 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 EPHA1P21709 976 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 GPR50Q13585 617 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 FAM26DQ5JW98 314 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 PRAMEF20Q5VT98 475 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 PXKQ7Z7A4 578 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 OR4M2Q8NGB6 313 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 WDR83Q9BRX9 315 aaKnown RBP14.07□□□□□ -0.16
UBE3B-202ENST00000342494 FGF21Q9NSA1 209 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 TMEM45AQ9NWC5 275 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF337Q9Y3M9 751 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 TVP23AA6NH52 213 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 SERPINE2P07093 398 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 ADH6P28332 368 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 PRDX3P30048 256 aaKnown RBP14.07□□□□□ -0.16
UBE3B-202ENST00000342494 GABARAPL2P60520 117 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 TMEM176BQ3YBM2 270 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-202ENST00000342494 PIP5KL1Q5T9C9 394 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 GAREM2Q75VX8 874 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF417Q8TAU3 575 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 SYNPO2LQ9H987 977 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 PADI1Q9ULC6 663 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 SLC43A1O75387 559 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 RACK1P63244 317 aaKnown RBP14.07□□□□□ -0.16
UBE3B-202ENST00000342494 FGL1Q08830 312 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 RAB31Q13636 194 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 SHHQ15465 462 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF423Q2M1K9 1284 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 MKXQ8IYA7 352 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 TRUB1Q8WWH5 349 aaKnown RBP14.07□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF223Q9UK11 482 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-202ENST00000342494 ST14Q9Y5Y6 855 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 LSM1O15116 133 aaKnown RBP14.06□□□□□ -0.16
UBE3B-202ENST00000342494 EGFP01133 1207 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 F11P03951 625 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 S100PP25815 95 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 CD34P28906 385 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 CCL11P51671 97 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 SFRP4Q6FHJ7 346 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF695Q8IW36 515 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 LSM14AQ8ND56 463 aaKnown RBP14.06□□□□□ -0.16
UBE3B-202ENST00000342494 CARD8Q9Y2G2 431 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 HHLA1C9JL84 531 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 IVDP26440 423 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 PRSS3P35030 304 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 HLCSP50747 726 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 TMEM244Q5VVB8 128 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 MTFR2Q6P444 385 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 MARVELD2Q8N4S9 558 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 IL17RDQ8NFM7 739 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 EIF5A2Q9GZV4 153 aaKnown RBP14.06□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF443Q9Y2A4 671 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-202ENST00000342494 A8MV72 311 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-202ENST00000342494 NKAIN2Q5VXU1 208 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 GPR149Q86SP6 731 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 DTWD1Q8N5C7 304 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 ENDOVQ8N8Q3 282 aaKnown RBP14.06□□□□□ -0.16
UBE3B-202ENST00000342494 SLC6A18Q96N87 628 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 NUDT22Q9BRQ3 303 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 GJB3O75712 270 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 GABRA2P47869 451 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 TBRG1Q3YBR2 411 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 ESCO2Q56NI9 601 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 ASRGL1Q7L266 308 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 SLC16A14Q7RTX9 510 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 TMEM178AQ8NBL3 297 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 OR5D14Q8NGL3 314 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 OR5W2Q8NH69 310 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 ST6GALNAC5Q9BVH7 336 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 RANBP3Q9H6Z4 567 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-202ENST00000342494 EVA1AQ9H8M9 152 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 SMOXQ9NWM0 555 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 THAP10Q9P2Z0 257 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-202ENST00000342494 A0A087WUU8 490 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 NKPD1Q17RQ9 610 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 TMEM150AQ86TG1 271 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 OR13J1Q8NGT2 312 aa14.06□□□□□ -0.16
UBE3B-202ENST00000342494 CACNG3O60359 315 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 TOXO94900 526 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 CTSL3PQ5NE16 218 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 MEX3DQ86XN8 651 aaKnown RBP14.05□□□□□ -0.16
UBE3B-202ENST00000342494 OR4K15Q8NH41 348 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 ACOT11Q8WXI4 607 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-202ENST00000342494 CHFRQ96EP1 664 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 SLC39A13Q96H72 371 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 CTRCQ99895 268 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 CD93Q9NPY3 652 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 MARCH5Q9NX47 278 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 AIFM1O95831 613 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 CBX7O95931 251 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 CD40LGP29965 261 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 WNT4P56705 351 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 KCNJ10P78508 379 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF616Q08AN1 781 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 GK3PQ14409 553 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 SERPINA11Q86U17 422 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 CACNG6Q9BXT2 260 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 HDAC8Q9BY41 377 aa14.05□□□□□ -0.16
UBE3B-202ENST00000342494 ARNT2Q9HBZ2 717 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms