RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TMEM200AQ86VY9 491 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 ANKRD46Q86W74 232 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 GCNT2Q8N0V5 402 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 OR5M1Q8NGP8 315 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 SH3YL1Q96HL8 342 aaPredicted RBP12□□□□□ -0.49
SIRPB3P-201ENST00000340424 RNF145Q96MT1 663 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 C7orf26Q96N11 449 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 OR52E6Q96RD3 313 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 PANX1Q96RD7 426 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 SLC35A5Q9BS91 424 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 RBM24Q9BX46 236 aaKnown RBP12□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZNF350Q9GZX5 532 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 SERHL2Q9H4I8 314 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 WDR55Q9H6Y2 383 aaPredicted RBP12□□□□□ -0.49
SIRPB3P-201ENST00000340424 CRIM1Q9NZV1 1036 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZIM2Q9NZV7 527 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 MCTS1Q9ULC4 181 aaKnown RBP12□□□□□ -0.49
SIRPB3P-201ENST00000340424 ICAM5Q9UMF0 924 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 KCNE3Q9Y6H6 103 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 GOLGA8QA0A0J9YX86 632 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 GOLGA8OA6NCC3 632 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 A8MXE2 369 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 GOLGA8NF8WBI6 632 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 EIF1AYO14602 144 aaKnown RBP11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZNF264O43296 627 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 GMFGO60234 142 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 KIAA0513O60268 411 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 SLC22A3O75751 556 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 TGDSO95455 350 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 NUDT14O95848 222 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 UBL4AP11441 157 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 EPXP11678 715 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 AGFG1P52594 562 aaKnown RBP11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 UFM1P61960 85 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 RPS26P62854 115 aaKnown RBP11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 HPCAP84074 193 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 CBFBQ13951 182 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 DAZAP2Q15038 168 aaPredicted RBP11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 NXNQ6DKJ4 435 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 MSANTD1Q6ZTZ1 278 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 CDH24Q86UP0 819 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 LURAP1LQ8IV03 231 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZNF614Q8N883 585 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 FNDC9Q8TBE3 224 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 LRRC8CQ8TDW0 803 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 SMPDL3BQ92485 455 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 FIG4Q92562 907 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZNF75CPQ92670 426 aaPredicted RBP11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 PMM1Q92871 262 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 ARSGQ96EG1 525 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 MRGPRX4Q96LA9 322 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 OR51I1Q9H343 314 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 TIGARQ9NQ88 270 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 GLRX2Q9NS18 164 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 EDARQ9UNE0 448 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 LIPT1Q9Y234 373 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 AKAP9Q99996 3911 aa11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 ANKRD17O75179 2603 aaKnown RBP11.99□□□□□ -0.49
SIRPB3P-201ENST00000340424 MED12LQ86YW9 2145 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 FAM221AA4D161 298 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 SERINC4A6NH21 518 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 CCDC154A6NI56 674 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 H0YC42 278 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 ETV2O00321 342 aaPredicted RBP11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 UBDO15205 165 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 CTAG2O75638 210 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 PABPC4LP0CB38 370 aaKnown RBP11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 CD8BP10966 210 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 LSP1P33241 339 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 MDH1P40925 334 aaKnown RBP11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 EIF1AXP47813 144 aaKnown RBP11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 TPD52P55327 224 aaPredicted RBP11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 IRX1P78414 480 aaPredicted RBP11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 GUSBP1Q15486 140 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 PDZK1Q5T2W1 519 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 GTF2IRD2BQ6EKJ0 949 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 EIF3MQ7L2H7 374 aaKnown RBP11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 LUZP2Q86TE4 346 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 GTF2IRD2Q86UP8 949 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZZZ3Q8IYH5 903 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 CNEP1R1Q8N9A8 125 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 OR5W2Q8NH69 310 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 OR10D3Q8NH80 312 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 OR2V1Q8NHB1 315 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 BCAS4Q8TDM0 211 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 GPR119Q8TDV5 335 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 STARD4Q96DR4 205 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 ADGRG7Q96K78 797 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 TEX37Q96LM6 180 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 KLHL15Q96M94 604 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 DACH2Q96NX9 599 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 SLC39A3Q9BRY0 314 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 PRRG4Q9BZD6 226 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 LAT2Q9GZY6 243 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 SAP130Q9H0E3 1048 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 RMND5AQ9H871 391 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 SDR39U1Q9NRG7 319 aaPredicted RBP11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 GALNT8Q9NY28 637 aa11.98□□□□□ -0.49
SIRPB3P-201ENST00000340424 ELOVL5Q9NYP7 299 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms