RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ROPN1LQ96C74 230 aa13.14□□□□□ -0.31
ERCC1-203ENST00000340192 ZNF559Q9BR84 538 aa13.14□□□□□ -0.31
ERCC1-203ENST00000340192 TMEM185BQ9H7F4 350 aa13.14□□□□□ -0.31
ERCC1-203ENST00000340192 TCF7L2Q9NQB0 619 aa13.14□□□□□ -0.31
ERCC1-203ENST00000340192 POLE3Q9NRF9 147 aa13.14□□□□□ -0.31
ERCC1-203ENST00000340192 SLC6A13Q9NSD5 602 aa13.14□□□□□ -0.31
ERCC1-203ENST00000340192 FOXD3Q9UJU5 478 aaPredicted RBP13.14□□□□□ -0.31
ERCC1-203ENST00000340192 ZNF175Q9Y473 711 aa13.14□□□□□ -0.31
ERCC1-203ENST00000340192 WDR45Q9Y484 360 aa13.14□□□□□ -0.31
ERCC1-203ENST00000340192 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 PRAMEF27A3QJZ7 478 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 POLR3GO15318 223 aaPredicted RBP13.13□□□□□ -0.31
ERCC1-203ENST00000340192 EIF4E2O60573 245 aaKnown RBP13.13□□□□□ -0.31
ERCC1-203ENST00000340192 TNFSF13O75888 250 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 CRHP06850 196 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 GUSBP08236 651 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 IL11P20809 199 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 ME2P23368 584 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 PEX19P40855 299 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 KIR2DL3P43628 341 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 EIF1AXP47813 144 aaKnown RBP13.13□□□□□ -0.31
ERCC1-203ENST00000340192 IDH3AP50213 366 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 RAC1P63000 192 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 EEF1A1P68104 462 aaKnown RBP13.13□□□□□ -0.31
ERCC1-203ENST00000340192 SKP2Q13309 424 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 MAPK14Q16539 360 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 SGCBQ16585 318 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 CTU2Q2VPK5 515 aaKnown RBP13.13□□□□□ -0.31
ERCC1-203ENST00000340192 TIGD2Q4W5G0 525 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 GPAT3Q53EU6 434 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 COX20Q5RI15 118 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 EEF1A1P5Q5VTE0 462 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 AP1ARQ63HQ0 302 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 DNAJC14Q6Y2X3 702 aaPredicted RBP13.13□□□□□ -0.31
ERCC1-203ENST00000340192 OR5W2Q8NH69 310 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 OR10D3Q8NH80 312 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 PNPT1Q8TCS8 783 aaKnown RBP13.13□□□□□ -0.31
ERCC1-203ENST00000340192 VPS33AQ96AX1 596 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 ZNF524Q96C55 264 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 ADGRG7Q96K78 797 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 EBF4Q9BQW3 602 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 SAP130Q9H0E3 1048 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 PIGMQ9H3S5 423 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 RNF122Q9H9V4 155 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 PACSIN3Q9UKS6 424 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 GPC6Q9Y625 555 aaPredicted RBP13.13□□□□□ -0.31
ERCC1-203ENST00000340192 OTOGQ6ZRI0 2925 aa13.13□□□□□ -0.31
ERCC1-203ENST00000340192 HRNRQ86YZ3 2850 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-203ENST00000340192 FAM234BA2RU67 622 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 TNFSF11O14788 317 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 ADAMDEC1O15204 470 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 CYP7B1O75881 506 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 AQP8O94778 261 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 H6PDO95479 791 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 CSTAP01040 98 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 PRKCAP17252 672 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 ELK4P28324 431 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 CPA2P48052 419 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 CCR4P51679 360 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 AQP5P55064 265 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 HPCAP84074 193 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 CBFBQ13951 182 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 SYPL1Q16563 259 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 PPP4R4Q6NUP7 873 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 VWA1Q6PCB0 445 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 FRRS1Q6ZNA5 592 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 MSANTD1Q6ZTZ1 278 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 ESPNLQ6ZVH7 1005 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 EIF3MQ7L2H7 374 aaKnown RBP13.12□□□□□ -0.31
ERCC1-203ENST00000340192 KIF18BQ86Y91 864 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 ZZZ3Q8IYH5 903 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 LILRA2Q8N149 483 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 ZNF619Q8N2I2 560 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 CNEP1R1Q8N9A8 125 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 TOR1AIP2Q8NFQ8 470 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 FBXO27Q8NI29 283 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 CKAP2Q8WWK9 683 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 ZG16BQ96DA0 208 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 STARD4Q96DR4 205 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 TRNT1Q96Q11 434 aaKnown RBP13.12□□□□□ -0.31
ERCC1-203ENST00000340192 THUMPD3Q9BV44 507 aaKnown RBP13.12□□□□□ -0.31
ERCC1-203ENST00000340192 RBM24Q9BX46 236 aaKnown RBP13.12□□□□□ -0.31
ERCC1-203ENST00000340192 LAT2Q9GZY6 243 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 RMND5AQ9H871 391 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 GALNT8Q9NY28 637 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 CRIM1Q9NZV1 1036 aa13.12□□□□□ -0.31
ERCC1-203ENST00000340192 A0A0J9YW62 118 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 EFNA2O43921 213 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 CXCL13O43927 109 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 SMNDC1O75940 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERCC1-203ENST00000340192 ANP32DO95626 131 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 NTN1O95631 604 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 KRT75O95678 551 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 UBTFL6P0CB48 400 aaPredicted RBP13.11□□□□□ -0.31
ERCC1-203ENST00000340192 ZCCHC18P0CG32 403 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 FCGR2AP12318 317 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 ADH6P28332 368 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 SHC1P29353 583 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 SFTPDP35247 375 aa13.11□□□□□ -0.31
ERCC1-203ENST00000340192 KIR2DL2P43627 348 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms