RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 SLC7A9P82251 487 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 KIAA0141Q14154 515 aaPredicted RBP12.14□□□□□ -0.47
USP47-202ENST00000339865 ZMAT1Q5H9K5 638 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 LANCL3Q6ZV70 420 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 OR1S2Q8NGQ3 325 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 DERL2Q9GZP9 239 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 FAM96BQ9Y3D0 163 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 CACNA1IQ9P0X4 2223 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 SLC22A23A1A5C7 686 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 EDN3P14138 238 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 CPT2P23786 658 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 IL4RP24394 825 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 C6orf120Q7Z4R8 191 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.13□□□□□ -0.47
USP47-202ENST00000339865 TMEM104Q8NE00 496 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 PPTC7Q8NI37 304 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 SEC22AQ96IW7 307 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 C12orf10Q9HB07 376 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 SLC2A6Q9UGQ3 507 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.13□□□□□ -0.47
USP47-202ENST00000339865 RAB27BO00194 218 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 GNB2P62879 340 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 GRB7Q14451 532 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 SBSNQ6UWP8 590 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 MAMDC4Q6UXC1 1216 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 NANOS1Q8WY41 292 aaKnown RBP12.13□□□□□ -0.47
USP47-202ENST00000339865 ZNF331Q9NQX6 463 aaPredicted RBP12.13□□□□□ -0.47
USP47-202ENST00000339865 CPNE7Q9UBL6 633 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 KCNK6Q9Y257 313 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 STXBP5LQ9Y2K9 1186 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 PRAMEF27A3QJZ7 478 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 BET1O15155 118 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 PFKMP08237 780 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 FAM163BP0C2L3 166 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 ZNF44P15621 663 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 ZNF17P17021 662 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 MYF6P23409 242 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 PLCXD2Q0VAA5 305 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 GBX1Q14549 363 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 ZNF678Q5SXM1 525 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 PRAMEF8Q5VWM4 474 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 PRAMEF9Q5VWM5 478 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 PRAMEF7Q5VXH5 474 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 NXPE4Q6UWF7 544 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 USP50Q70EL3 339 aaPredicted RBP12.13□□□□□ -0.47
USP47-202ENST00000339865 DDIT4LQ96D03 193 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 CUTCQ9NTM9 273 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 LOC285095A0A1B0GVY8 99 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 FEZF1A0PJY2 475 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 SLC38A8A6NNN8 435 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 WNT10BO00744 389 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 ADAM12O43184 909 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 C21orf62-AS1Q17RA5 79 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 MBLAC2Q68D91 279 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 OR9A2Q8NGT5 310 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 FBXL18Q96ME1 805 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 CWH43Q9H720 699 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 KIAA2026Q5HYC2 2103 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 KDM4FA0A1W2PPD8 638 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 AQP7O14520 342 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 FAM189A1O60320 539 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 KLF8O95600 359 aaPredicted RBP12.13□□□□□ -0.47
USP47-202ENST00000339865 TBX18O95935 607 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 TIMP2P16035 220 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 RAP2BP61225 183 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 METAP1DQ6UB28 335 aaPredicted RBP12.13□□□□□ -0.47
USP47-202ENST00000339865 OR6T1Q8NGN1 323 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 ZFAND1Q8TCF1 268 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 SLC45A3Q96JT2 553 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 C12orf57Q99622 126 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 MTCH1Q9NZJ7 389 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 PRR36Q9H6K5 1346 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 RNGTTO60942 597 aaKnown RBP12.13□□□□□ -0.47
USP47-202ENST00000339865 CLDN1O95832 211 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 MEP1BQ16820 701 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 RNLSQ5VYX0 342 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 Q6ZVU0 165 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 SLC24A5Q71RS6 500 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 ZNF765Q7L2R6 523 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 KIAA0907Q7Z7F0 614 aaPredicted RBP12.13□□□□□ -0.47
USP47-202ENST00000339865 KDM1BQ8NB78 822 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 ZDHHC7Q9NXF8 308 aa12.13□□□□□ -0.47
USP47-202ENST00000339865 ANHXE9PGG2 379 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 RNF225M0QZC1 329 aaPredicted RBP12.12□□□□□ -0.47
USP47-202ENST00000339865 JRKO75564 520 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 DIO3P55073 304 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 ZNF33BQ06732 778 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 UBE2NLQ5JXB2 153 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 BRAT1Q6PJG6 821 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 KIAA1191Q96A73 305 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 ZMYND19Q96E35 227 aaPredicted RBP12.12□□□□□ -0.47
USP47-202ENST00000339865 SAMD8Q96LT4 415 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 TSSK2Q96PF2 358 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 FCRL5Q96RD9 977 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 ZNF696Q9H7X3 374 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.12□□□□□ -0.47
USP47-202ENST00000339865 LIPT1Q9Y234 373 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 UGT2A1Q9Y4X1 527 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 RPL17P18621 184 aaKnown RBP12.12□□□□□ -0.47
USP47-202ENST00000339865 PLCXD3Q63HM9 321 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms