RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 PCNX3Q9H6A9 2034 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 TRAPPC13A5PLN9 417 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 A6NL46 340 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 ADAM10O14672 748 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 SEMA7AO75326 666 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 CYP7B1O75881 506 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 DIRAS1O95057 198 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 GADD45GO95257 159 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 H1F0P07305 194 aaKnown RBP13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 CCL3P10147 92 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 PRG2P13727 222 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 FPR1P21462 350 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 DNAJA1P31689 397 aaKnown RBP13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 ACAA2P42765 397 aaKnown RBP13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 P2RX1P51575 399 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 CCR4P51679 360 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 HMGA2P52926 109 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 ST3GAL3Q11203 375 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 TUBA3CQ13748 450 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 CBFBQ13951 182 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 ENTPD8Q5MY95 495 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 ZNF468Q5VIY5 522 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 TUBA3EQ6PEY2 450 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 LINC00696Q6ZRV3 163 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 PACS2Q86VP3 889 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 ZDHHC13Q8IUH4 622 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 PSD4Q8NDX1 1056 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 OR5W2Q8NH69 310 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 EME1Q96AY2 570 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 ARSGQ96EG1 525 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 RTN4RQ9BZR6 473 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 ZNF552Q9H707 407 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 TMEM27Q9HBJ8 222 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 GALNT9Q9HCQ5 603 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 ICAM5Q9UMF0 924 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 TESMINQ9Y4I5 508 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 CACNA1GO43497 2377 aa13.27□□□□□ -0.28
NIPAL3-202ENST00000339255 FRYQ5TBA9 3013 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 MPDZO75970 2070 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 OR5H15A6NDH6 313 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 K7ENP7 123 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 FFAR1O14842 300 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 TPST2O60704 377 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 WDPCPO95876 746 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 ZNF23P17027 643 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 PGCP20142 388 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 HTR2AP28223 471 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 GCKP35557 465 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 CD96P40200 585 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 PTGDSP41222 190 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 YAP1P46937 504 aaKnown RBP13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 PTDSS1P48651 473 aaKnown RBP13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 CCL11P51671 97 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 CDH12P55289 794 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 PIN1Q13526 163 aaPredicted RBP13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 NDUFAF6Q330K2 333 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 WBP2NLQ6ICG8 309 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 INO80CQ6PI98 192 aaPredicted RBP13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 CBLN3Q6UW01 205 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 HIPK1Q86Z02 1210 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 OR5K1Q8NHB7 308 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 B4GALNT2Q8NHY0 566 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 DUSP19Q8WTR2 217 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 DNAJA4Q8WW22 397 aaPredicted RBP13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 NTNG2Q96CW9 530 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 DTNBP1Q96EV8 351 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 C9orf16Q9BUW7 83 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 VCXQ9H320 206 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 ACER3Q9NUN7 267 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 SELENONQ9NZV5 590 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 RPS6KB2Q9UBS0 482 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 OAZ3Q9UMX2 235 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 LYVE1Q9Y5Y7 322 aa13.27□□□□□ -0.29
NIPAL3-202ENST00000339255 TMEM8BA6NDV4 472 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 ARRDC5A6NEK1 342 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 CPSF4LA6NMK7 179 aaKnown RBP13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 G3V2T6 193 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 J3KTA2 159 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 TNFRSF11BO00300 401 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 SLC25A12O75746 678 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 NUDT14O95848 222 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 ELAVL4P26378 380 aaKnown RBP13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 RYKP34925 604 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 HOXC5Q00444 222 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 GANABQ14697 944 aaKnown RBP13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 TRAM2Q15035 370 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 OR1C1Q15619 314 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 COL28A1Q2UY09 1125 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 OGFRL1Q5TC84 451 aaPredicted RBP13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 PRAMEF20Q5VT98 475 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 BICRALQ6AI39 1079 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 ULK3Q6PHR2 472 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 SHQ1Q6PI26 577 aaKnown RBP13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 UNQ6494/PRO21346Q6UXR6 183 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 MDGA2Q7Z553 956 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 LINC00471Q8N535 108 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 ICA1LQ8NDH6 482 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 FDCSPQ8NFU4 85 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 HAS2Q92819 552 aa13.26□□□□□ -0.29
NIPAL3-202ENST00000339255 SH3YL1Q96HL8 342 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms