RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SORT1Q99523 831 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 EDARQ9UNE0 448 aa11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 NIPBLQ6KC79 2804 aaeCLIP11.94□□□□□ -0.5
NUDCD3-201ENST00000338427 ROS1P08922 2347 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 IGHV3-15A0A0B4J1V0 119 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 A0A1W2PNR3 127 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 ESPNB1AK53 854 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 SCN2BO60939 215 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 SS18L1O75177 396 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 BCAS1O75363 584 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 CYP7B1O75881 506 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 ENPP1P22413 925 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 LCN1P31025 176 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 SERPINB5P36952 375 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 RPL3P39023 403 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 P2RX1P51575 399 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 NME5P56597 212 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 MAPK14Q16539 360 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 ACKR1Q16570 336 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 PDZK1Q5T2W1 519 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 ESPNLQ6ZVH7 1005 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 WFDC8Q8IUA0 241 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 TUSC5Q8IXB3 177 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 CIARTQ8N365 385 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 OR56A1Q8NGH5 318 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 ABHD3Q8WU67 409 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 RAB8BQ92930 207 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 ZG16BQ96DA0 208 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 DNAJA3Q96EY1 480 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 POM121Q96HA1 1249 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 GMPPAQ96IJ6 420 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 KLHL15Q96M94 604 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 PRPF18Q99633 342 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 BHLHE41Q9C0J9 482 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 QRSL1Q9H0R6 528 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 CENPHQ9H3R5 247 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 KCNK9Q9NPC2 374 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 ATAD3AQ9NVI7 634 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 ZNF226Q9NYT6 803 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 MKLN1Q9UL63 735 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 MCTS1Q9ULC4 181 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 DTNAQ9Y4J8 743 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 FREM1Q5H8C1 2179 aa11.93□□□□□ -0.5
NUDCD3-201ENST00000338427 PRAMEF27A3QJZ7 478 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 C7orf72A4D263 438 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 RGS16O15492 202 aaPredicted RBP11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 SERPINE1P05121 402 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 TUBBP07437 444 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 OR12D1P0DN82 309 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 NID1P14543 1247 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 EDNRAP25101 427 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 SLC1A6P48664 564 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 OCRLQ01968 901 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 MISPQ8IVT2 679 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 OR4A15Q8NGL6 344 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 OR6K3Q8NGY3 331 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 THUMPD3Q9BV44 507 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 NUF2Q9BZD4 464 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 HOXD1Q9GZZ0 328 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 OR51I1Q9H343 314 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 COQ10BQ9H8M1 238 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 STOML1Q9UBI4 398 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 EMC9Q9Y3B6 208 aa11.92□□□□□ -0.5
NUDCD3-201ENST00000338427 DSCAMO60469 2012 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 UQCRHLA0A096LP55 91 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 SERINC4A6NH21 518 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 DHRS4L1P0CG22 281 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 FCGR2AP12318 317 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 PRKCAP17252 672 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 AGTR1P30556 359 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 PCYT1AP49585 367 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 CCR4P51679 360 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 QPRTQ15274 297 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 MTERF4Q7Z6M4 381 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 ZNF619Q8N2I2 560 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 MREGQ8N565 214 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 SFXN5Q8TD22 340 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 XAGE5Q8WWM1 108 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 TEX37Q96LM6 180 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 ZIM3Q96PE6 472 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 PAIP2Q9BPZ3 127 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 DPY30Q9C005 99 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 BEX4Q9NWD9 120 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 ING1Q9UK53 422 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 RAP2CQ9Y3L5 183 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 ARID1AO14497 2285 aa11.91□□□□□ -0.5
NUDCD3-201ENST00000338427 RNF103-CHMP3A0A140T963 221 aa11.9□□□□□ -0.5
NUDCD3-201ENST00000338427 CLDN24A6NM45 220 aa11.9□□□□□ -0.5
NUDCD3-201ENST00000338427 ANKRD28O15084 1053 aa11.9□□□□□ -0.5
NUDCD3-201ENST00000338427 ZNF264O43296 627 aa11.9□□□□□ -0.5
NUDCD3-201ENST00000338427 UGT2B17O75795 530 aa11.9□□□□□ -0.5
NUDCD3-201ENST00000338427 GOSR1O95249 250 aa11.9□□□□□ -0.5
NUDCD3-201ENST00000338427 H6PDO95479 791 aa11.9□□□□□ -0.5
NUDCD3-201ENST00000338427 DDX5P17844 614 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-201ENST00000338427 FLNAP21333 2647 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-201ENST00000338427 ME2P23368 584 aa11.9□□□□□ -0.5
NUDCD3-201ENST00000338427 IL12AP29459 219 aa11.9□□□□□ -0.5
NUDCD3-201ENST00000338427 EIF1P41567 113 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms