RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 GPR119Q8TDV5 335 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 TMEM234Q8WY98 164 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 CNOT9Q92600 299 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 MIB2Q96AX9 1013 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 SARAFQ96BY9 339 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 ARSGQ96EG1 525 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 PINK1Q9BXM7 581 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 EVA1AQ9H8M9 152 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 TAS2R1Q9NYW7 299 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 STOML1Q9UBI4 398 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 ZFYVE26Q68DK2 2539 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 A0A1B0GTH9 108 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 CDHR4A6H8M9 788 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 OR14I1A6ND48 311 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 CFAP73A6NFT4 308 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 CLDN24A6NM45 220 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 C17orf51A8MQB3 221 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 AQP7O14520 342 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 GYG2O15488 501 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 OIP5O43482 229 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 WISP2O76076 250 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 ACTL6AO96019 429 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 HTR1EP28566 365 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 KDELR2P33947 212 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 RYKP34925 604 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 PTGS2P35354 604 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 CPOXP36551 454 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 CASP6P55212 293 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 COPZ1P61923 177 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 EEF1A1P68104 462 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 BNIP1Q12981 228 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 SKP2Q13309 424 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 IGFBP7Q16270 282 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 NDUFAF6Q330K2 333 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 ENPP6Q6UWR7 440 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 C6orf89Q6UWU4 347 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 ZNF836Q6ZNA1 936 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 CLIP4Q8N3C7 705 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 ZNF563Q8TA94 476 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 ABTB1Q969K4 478 aaPredicted RBP10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 SLC35B4Q969S0 331 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 ZBTB8AQ96BR9 441 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 SFXN2Q96NB2 322 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 PIGQQ9BRB3 760 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 SLC6A15Q9H2J7 730 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 MED17Q9NVC6 651 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 RLIMQ9NVW2 624 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 ACAD8Q9UKU7 415 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 BAG5Q9UL15 447 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 USP22Q9UPT9 525 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 VDAC3Q9Y277 283 aa10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 RPH3AQ9Y2J0 694 aaPredicted RBP10.81□□□□□ -0.68
SPTLC1-202ENST00000337841 EBAG9O00559 213 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 CXCR6O00574 342 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 PRRG2O14669 202 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 BCKDKO14874 412 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 GCM2O75603 506 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 C8BP07358 591 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 GP1BBP13224 206 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 HSD17B1P14061 328 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 ABOP16442 354 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 CHMP24386 653 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 ADH6P28332 368 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 KCNJ5P48544 419 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 DMTNQ08495 405 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 QPRTQ15274 297 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 SF3B4Q15427 424 aaKnown RBP eCLIP10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 DNAL1Q4LDG9 190 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 WLSQ5T9L3 541 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 RAET1LQ5VY80 246 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 GLYATQ6IB77 296 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 ARSKQ6UWY0 536 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 SPPL2CQ8IUH8 684 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 RNF148Q8N7C7 305 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 SMYD1Q8NB12 490 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 FAM71CQ8NEG0 241 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 LZICQ8WZA0 190 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 ST8SIA1Q92185 356 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 FIG4Q92562 907 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 BTBD10Q9BSF8 475 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 SERINC1Q9NRX5 453 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 ACER3Q9NUN7 267 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 ADPRHL2Q9NX46 363 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 DNAJB12Q9NXW2 375 aaKnown RBP10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 CD300AQ9UGN4 299 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 PRPF19Q9UMS4 504 aaKnown RBP10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 SLC6A5Q9Y345 797 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 HRH3Q9Y5N1 445 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 FAM208BQ5VWN6 2430 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 NBEAQ8NFP9 2946 aa10.8□□□□□ -0.68
SPTLC1-202ENST00000337841 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 OR2M5A3KFT3 312 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 C7orf72A4D263 438 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 B4DXG7 233 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 NPIPA2E9PIF3 369 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 NPIPA3F8WFD2 350 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 SYT5O00445 386 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 FAAHO00519 579 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 TPST1O60507 370 aa10.79□□□□□ -0.68
SPTLC1-202ENST00000337841 LGI1O95970 557 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms